Croceicoccus naphthovorans: AB433_16505
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Entry
AB433_16505 CDS
T03964
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cna
Croceicoccus naphthovorans
Pathway
cna03030
DNA replication
cna03430
Mismatch repair
cna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB433_16505
03430 Mismatch repair
AB433_16505
03440 Homologous recombination
AB433_16505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cna03032
]
AB433_16505
03400 DNA repair and recombination proteins [BR:
cna03400
]
AB433_16505
Enzymes [BR:
cna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB433_16505
DNA replication proteins [BR:
cna03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB433_16505
DNA repair and recombination proteins [BR:
cna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB433_16505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AKM11210
UniProt:
A0A0G3XI27
LinkDB
All DBs
Position
3334174..3334875
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AA seq
233 aa
AA seq
DB search
MREIVFDTETTGLDPRTGDRMVEIGCIEMVNRVATGQVFHAYFNPDRDMPEEAERVHGLS
AAFLSDKPRFVEKVADLLAFIGDSPLVAHNAGFDFNFLNAELALCEMEAVCLTRMVDTVQ
IAKKKHPGAKLSLDALCTRYGVDRSHRTKHGALLDAELLAQVYVELTGGRQIGLELAVDN
SAAPIAIETEVVVATAGREFRPARPHAASAEEIQRHEAFIATLKDPIWARGAA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcgtattcgataccgaaaccaccggactggacccccgtacgggcgaccgc
atggtcgaaatcggctgcatcgaaatggtgaaccgggtcgccaccggccaggtgttccac
gcctacttcaatccagaccgcgatatgcccgaagaggcggagcgcgtgcacggtctttcc
gccgctttcctttcggacaaaccgcgctttgtcgaaaaagtggccgacctgctcgccttt
atcggcgattcgccgctggtcgcgcacaatgccgggttcgacttcaacttcctgaacgcc
gaactggccctgtgcgagatggaggccgtgtgcctgacccgcatggtcgacaccgtgcag
atcgccaagaagaagcaccccggcgcgaaactgtcgctcgatgcgctgtgcacccggtat
ggcgtggaccgcagccaccggacgaagcacggcgcgctgctcgatgcagagctgctggcg
caagtctatgtggaactgactggtgggcggcagattgggttggagcttgcggttgataat
agcgccgcgcccatagcaatcgaaaccgaagtggtggttgcgaccgccggacgcgaattc
cgcccggctcgtccgcacgctgcctcggccgaagaaattcagcggcacgaggcctttatc
gcgacgttgaaggaccccatctgggcaaggggagcagcctga
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