Croceicoccus naphthovorans: AB433_17140
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Entry
AB433_17140 CDS
T03964
Name
(GenBank) RNA polymerase
KO
K24073
RNA polymerase sigma factor CnrH
Organism
cna
Croceicoccus naphthovorans
Brite
KEGG Orthology (KO) [BR:
cna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cna03021
]
AB433_17140
Transcription machinery [BR:
cna03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AB433_17140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
HTH_Tnp_ISL3
HTH_28
DUF134
HTH_23
KORA
HTH_1
HTH_AsnC-type
GerE
Motif
Other DBs
NCBI-ProteinID:
AKM11314
UniProt:
A0A0G3XL43
LinkDB
All DBs
Position
complement(3459108..3459668)
Genome browser
AA seq
186 aa
AA seq
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MTQAQSRSETALVEDARRGSKAAYGTLVEPHIARLIALATRMLASPHQAEDAVQDGLASV
WVARHRLDPDRPVGPFLTTVVLNKCRDRLRKRKTARFFGLGAESETLAIVDDSPDPQEIA
MQRQELRMLLEQIERLPIRLREALILVSIDGRSQAEAAELLGVSEKAIETRIYRARQKLR
DRLENF
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcaggcgcaaagccggtccgagaccgccctggtcgaagatgcccgcaggggcagc
aaggcagcatatgggacgctggtcgaaccccatatagcgcggcttattgctttggcgaca
cgcatgcttgcgtctccgcatcaggccgaagacgctgttcaggacgggcttgcttcggtc
tgggtcgcccggcaccgcctcgacccggaccgtcctgttggcccttttttgacaacagtc
gtgctcaacaaatgccgcgacaggctgcgcaaacgcaaaacggcgcgctttttcggattg
ggcgcggaatctgaaacactggcgattgttgacgacagccccgatccgcaagagatcgcg
atgcagcgccaggaattgcgaatgctcctggagcaaatcgagcgtcttccgatccgtctt
cgcgaagcgctcatattggtcagtatcgacggacgcagccaggcggaagccgccgaactt
ctcggcgtgtcggaaaaggcaatcgagacccgcatctatcgtgcccggcaaaaattgcgc
gaccgcctggaaaatttttga
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