Caldicellulosiruptor naganoensis: OTJ99_000535 Help Entry OTJ99_000535      CDS       T08720                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism cnag  Caldicellulosiruptor naganoensis Pathway cnag03018   RNA degradation Brite KEGG Orthology (KO) [BR:cnag00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     OTJ99_000535  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cnag03019]     OTJ99_000535 Messenger RNA biogenesis [BR:cnag03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      OTJ99_000535 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B_6 pre-PUA_NIP7 Motif Other DBs NCBI-ProteinID:  WAM32040 UniProt:  A0ABY7BJW9 LinkDB All DBs Position 580174..581841 Genome browser AA seq 555 aa AA seqDB search MRKRPEHIIRIIPLGGLNEIGKNMTVVEVDDEIVVIDCGLAFPEDEMLGIDLVIPDVSYL VKNKEKVRALILTHGHEDHIGAIPYVLRDLNIPIYGTKLTLGLVEIKLMEFGIDLNSVKL FTVKAGDVISFNNMRVEFIRTTHSIADSVAIAIHTPLGAIVHTGDFKVDFTPIEGEPIDL IRFAELGKQGVLALLCDSTNAERPGFTLSEKTVGATFDRIFSQAQGRVIVATFSSHIHRV QQVINSAEKQGRKICVLGRSMVNVVNKALELGYLKMPDGMLIDVDELENYPPNKIVLITT GSQGEPMSALSRMASAEYKKVGIIPGDVVIISAAPIPGNEKFVNRVINDLFRQGAQVIYE DIDDIHVSGHACQEEIKLIHNLTRPKYSVPVHGEFKHLIHHAKLAMELGEKNVFILENGK VLEITKDSAKVVGSVQAGNVLVDGLGVGDVGNVVLRDRRHLAQDGLFIVVLTIDSSTRDV IAGPEIISRGFIYIKEAEPLIEEAKKVIKDVLYFCRKNDITEPNAIKVILKDNLKNFLFE RTRRNPMIIPIITEI NT seq 1668 nt NT seq  +upstreamnt  +downstreamnt atgagaaaaagaccagaacacataataagaattatcccccttggaggcttgaacgaaatt ggcaaaaacatgacagtagttgaagtagatgatgagattgttgtaattgactgtggtctt gcctttccagaagatgaaatgctgggtattgaccttgtcatacctgatgtgtcgtattta gtaaagaataaggaaaaggtaagagcattgatacttacacatgggcatgaagaccatatt ggtgcaattccgtatgttttgagagatttaaacattcctatttatggtacaaaacttaca cttgggcttgttgagataaagcttatggagtttgggatagacctaaactctgtcaagctc tttactgtcaaagcgggcgatgtaattagctttaataatatgcgagtggagtttatccga acaacacactctattgcagactctgttgcaattgctatacacacgccactgggggctatt gttcacacaggcgattttaaagtcgactttacaccaattgaaggtgagccgattgacctg attagatttgcagagcttggcaagcaaggtgttttagcacttttgtgcgactcaacaaac gctgagcgccctggatttactttgtctgaaaaaactgttggtgcaaccttcgacaggata ttttctcaagctcagggaagagttattgttgcaacattttcatcacacattcacagagtc cagcaggtgataaactctgcagaaaaacaaggtagaaagatttgtgttctgggaagaagc atggtaaatgttgttaacaaggcgcttgagcttggatatttgaagatgccagatggaatg ctgattgatgttgatgaacttgaaaactatcccccaaataaaatagtgcttattacaaca ggaagccagggcgagccaatgtcggctctttcgcgcatggcttctgcagagtataaaaaa gtaggtattataccaggtgacgttgtgataatctcagctgcgccaattcctggaaatgaa aagtttgtcaacagggtaataaacgacctttttagacagggggcacaggtgatttacgaa gacattgatgatatccacgtgtcaggtcatgcatgtcaagaggagataaagcttatacac aatctcacacggccaaaatacagtgtgcctgtgcatggggagtttaaacacttaatccac catgctaaacttgcaatggaacttggtgaaaagaatgtatttattctggaaaatggcaaa gtgcttgagataacaaaagactctgcaaaggttgttggcagcgttcaagcaggcaatgtg cttgttgatgggcttggtgttggtgatgttggaaatgttgtactacgtgacagacgtcat cttgctcaagatggactttttattgtggttctcacaattgattcatcaacaagagatgta attgctgggccagagataatctcaagagggtttatctatataaaagaagctgagccacta attgaagaggcaaaaaaggtgataaaggatgttttgtatttctgtagaaaaaatgatatt acagagccaaatgctataaaggttatattaaaagataatctaaagaatttcttgtttgaa aggacacgcagaaatcccatgataattcctataataaccgagatttaa

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