Caldicellulosiruptor naganoensis: OTJ99_000696
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Entry
OTJ99_000696 CDS
T08720
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cnag
Caldicellulosiruptor naganoensis
Brite
KEGG Orthology (KO) [BR:
cnag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnag03400
]
OTJ99_000696 (radA)
DNA repair and recombination proteins [BR:
cnag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OTJ99_000696 (radA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
AAA_24
AAA_16
AAA_22
GvpD_P-loop
AAA_14
AAA
NTPase_1
DUF7129
AAA_5
GvpD_bR2
ABC_tran
DXP_reductoisom
TniB
KdpD
CbiA
Motif
Other DBs
NCBI-ProteinID:
WAM32674
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Position
726719..728047
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AA seq
442 aa
AA seq
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MVYVCQECGYKTSKWLGRCPNCSSWDTLVGEYVEDKKKDITKPQQSNLTPLKLSDVATEE
ERFLCGIDELDSVLGGGFVKGELILLGGEPGIGKSTLLLQVGSILSKRMKVLYVSGEEGA
NQLKIRAERLKINGDIEILCETNFDLVEKLILELKPEFIIIDSIQTMYIPDNQSAPGSVT
QVRDVTMKLLKLAKSLKITIVIVGHVTKDGLIAGPRVLEHMVDCVLYFEGERFNTFRIIR
AYKNRFGPTNQLGIFEMTDSGLVEVKNPSSLFLESSYNVEGVAIYSAIEGTRAILLEIQA
LTTPTSFGTPRRTVTGIDYNRCVMLCAVLEKKVGLPLNVQDIYVNVAGGFKVTEPAADLA
IVCAIASSYKGVPIGDNVLIGEVGLTGEIRAVNSIEKRLNEAKKLGFERAIIPKRNSENL
SSDFGMKIYAMSNIEEVFDFIF
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggtttatgtctgtcaagaatgtggctacaagacttcaaagtggcttggaagatgtcca
aattgctcaagttgggacacgttagtgggagaatacgtagaggataagaaaaaagatatt
acaaaacctcaacaaagtaatttgacacctttaaagctctcagatgtcgcaacagaagaa
gagaggtttttatgtggaattgatgagcttgacagtgtccttggtggaggttttgtcaaa
ggtgagctgattttgcttggcggggagccagggatagggaagtcaactttgcttttgcag
gttggaagtatcttgagcaagaggatgaaggtattatatgtctctggtgaagaaggggca
aaccagttaaagatcagagcagaaaggctaaaaataaatggtgatattgagattttgtgt
gagacaaactttgaccttgttgaaaaactgattttggaactaaaaccagagtttatcata
atagattctattcagacaatgtatattccagataatcaatcagctccgggaagtgttaca
caggtaagagatgtgacaatgaaacttttgaagctggcaaaaagcttaaaaattacaatt
gtaattgttggacatgttacaaaagacggacttattgccggaccaagggttttagagcat
atggttgactgtgttttgtattttgaaggtgagcgatttaatacatttagaattataaga
gcttacaaaaaccgatttggaccaacaaaccagcttggaatatttgagatgaccgatagc
gggcttgttgaggtaaaaaatccttcaagcctctttttagagagtagctacaatgtagaa
ggagttgctatttactccgcaattgaagggacgcgcgctattttattggagattcaggca
ctgaccaccccgacatcttttggtacaccacgaaggactgtgaccggaattgactataac
aggtgtgtaatgctttgtgcagtacttgaaaaaaaagttggtcttcctttaaatgttcag
gatatatatgtgaatgttgcaggtggatttaaggttacagaacctgcggcagaccttgca
attgtgtgtgcaattgcctcaagttataagggcgtgccaattggagataatgtgttaata
ggtgaagtgggtttaaccggcgagattagagcagtaaatagcattgaaaaaaggctaaat
gaggctaaaaaacttggctttgagagagcaataattccaaagaggaattcagaaaatttg
tcttcagattttgggatgaagatatatgcaatgtcaaatatagaagaagtatttgatttt
atattctaa
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