Caldicellulosiruptor naganoensis: OTJ99_001281
Help
Entry
OTJ99_001281 CDS
T08720
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cnag
Caldicellulosiruptor naganoensis
Pathway
cnag03030
DNA replication
cnag03410
Base excision repair
cnag03420
Nucleotide excision repair
cnag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cnag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OTJ99_001281 (polA)
03410 Base excision repair
OTJ99_001281 (polA)
03420 Nucleotide excision repair
OTJ99_001281 (polA)
03440 Homologous recombination
OTJ99_001281 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnag03032
]
OTJ99_001281 (polA)
03400 DNA repair and recombination proteins [BR:
cnag03400
]
OTJ99_001281 (polA)
Enzymes [BR:
cnag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OTJ99_001281 (polA)
DNA replication proteins [BR:
cnag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OTJ99_001281 (polA)
DNA repair and recombination proteins [BR:
cnag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OTJ99_001281 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OTJ99_001281 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
CABIT
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WAM30530
UniProt:
A0ABY7BDL4
LinkDB
All DBs
Position
1299770..1302319
Genome browser
AA seq
849 aa
AA seq
DB search
MKLVIFDGNSILYRAFFALPELTTSTGIPTNAIYGFLNVLLKYLDSEKPDYVAVAFDKKG
RAARKSEYEEYKANRKPMPDSLQVQIPYVREILNALNIPILEHEGYEADDVIGTLVNRFK
DRDLEIVIITGDRDTLQLLDKNVIVKIVTTKFDKTTEDLYTIENVKEKYGVFAHQVVDYK
ALVGDASDNIPGVKGIGDKTAIKLLEEYQTLENIYQNLKNIKDSLREKLEAGKDMAFLSK
RLATIVCDLPVEVTLEELKTREWDKKRLYQLLLQLEFKSFIKRLGFSEELEEIKQTLQLP
KFNMKELYDISEIKGKEIYLLYSGDEGLFYVYDHQTSTIFTTTDKGIVKKLLNVQGIQKV
VYDLKNILHKVDFDKAYQIKDCNDVMLASYVLDSTRSSYDLETLFISYLNTDISAIKENK
CAGATVLLRNLWDELSKLIDLNSCQYVYENIEIPLVPILYEMEKIGFKVDKNTLQEYTKE
IESKLLKLEFQIYQIAGEWFNINSPKQLSYVLFEKLKLPVVKKTKTGYSTDAEVLEELYD
KHEIIPLILDYRMYTKILTTYCQGLMQAINPTTGRVHSNFIQTGTATGRLASAEPNLQNI
PVKYDEGRLIRKAFVPEEGYVLIDADYSQIELRILAHISEDERLINAFKNNLDIHSQTAA
EIFGVDVSQVTPTMRSQAKAVNFGIIYGISDYGLSRDIKISRKEAAEFINRYFEKYPKVK
EYLDNVVKFARENGFVLTLFNRKRYIKDIKSTNKNLRSYAERIAMNSPIQGSAADIMKIA
MIRVYRRLKENNLKSRIILQVHDELLIESPYEEKEVVKEIVKTEMENAVSLKVPLVVEVK
EGSNWYETK
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaagttagttatttttgatggtaacagtattctctatagagctttttttgcgttgccg
gaacttacaacatcaacgggtatccctacaaatgctatatatggttttttaaatgtactc
ttaaaatacttagattcagaaaaacctgattatgtggcagtggcatttgacaaaaaaggc
agagctgcacgaaaaagtgaatatgaagagtacaaagccaatcgaaaaccaatgccagat
tctctacaagttcagataccttatgtaagagagatactcaatgctcttaacattcctata
ttagaacacgaaggatatgaagctgatgacgtcataggcacgcttgtgaataggtttaaa
gaccgtgatttagagattgtaataataactggagacagagatactcttcagctacttgat
aaaaatgtaattgtcaaaatagttactacgaagtttgacaagaccacagaagatttgtat
accattgaaaatgtaaaagaaaaatatggtgtctttgcacatcaggttgttgattacaaa
gctttagtaggcgatgcatcagacaacatacctggtgttaagggaattggagataaaacg
gccataaaattattagaagaatatcagaccttggaaaatatataccaaaatctgaaaaac
atcaaagattctttaagagaaaagttagaagcaggtaaagatatggcatttttgtcgaaa
agattggcaactattgtgtgtgatttacctgttgaggtaactcttgaagagttaaaaaca
agagaatgggacaagaaaagactatatcagcttttgctacagcttgagttcaaaagtttc
ataaaaagattgggcttctcagaggagcttgaggagataaaacaaacacttcaacttcca
aaatttaacatgaaagaactgtatgatatctcagagataaagggcaaagaaatttatttg
ttatactcaggtgatgaaggacttttttacgtctatgaccatcaaacttcgactattttt
acaactactgacaaaggaattgttaaaaagctattaaatgtccaaggtattcaaaaggta
gtgtatgatttaaaaaatatactccataaagtggattttgataaagcttatcaaataaaa
gactgtaatgacgtcatgttggcttcatatgttttagacagtacacgtagttcatacgac
ttagagacattgtttatctcttatctcaatactgatatctctgcaataaaagaaaacaaa
tgtgctggtgctacagttttattaagaaatctttgggatgagctatccaaactcatagat
ttaaattcctgccaatacgtctatgaaaatattgaaatcccacttgttcctattttatat
gaaatggaaaaaattggttttaaggtggacaaaaataccttacaggaatatacaaaagag
attgagagcaagcttttaaaattagagtttcagatttatcaaatagcaggtgagtggttt
aacataaactcaccaaaacaactctcatatgtattattcgaaaaactgaaacttccagtt
gttaaaaagacaaaaacaggatattcaacagacgctgaggtgttagaagagttatatgac
aaacatgagataatacctcttatcttggattatagaatgtatacgaaaatactgacaact
tactgtcaaggactaatgcaagcaatcaatcctacaactggaagagtacattcaaatttt
attcaaacaggtacagcaaccggaagactcgcaagtgcggagcctaatctacaaaacatt
cccgtgaaatatgatgaaggaaggcttataagaaaagcgttcgttccagaggaaggttat
gtgctgatagatgctgattactctcagattgagcttaggatacttgctcatatctctgag
gatgaaagactaataaatgcttttaagaataaccttgacattcattcgcagacagcagca
gagatttttggtgtagatgtaagccaagttactccaactatgcgaagccaagcaaaagct
gttaactttggaattatatatggaatttcagactacggactttcacgggatataaagata
tcaagaaaagaagcagctgagtttattaatcgctattttgaaaagtatccgaaagtaaaa
gaatatctggacaatgttgtcaagtttgctcgtgaaaatgggtttgtattgacacttttt
aacagaaaaagatatatcaaggacataaagtctactaataaaaaccttagaagctacgca
gaaagaatagcaatgaattcacctatccaaggcagtgctgcagatatcatgaaaatagca
atgataagggtttatagaaggttaaaagagaacaatttaaaatcaaggattattttacaa
gttcatgatgagcttttgattgagtcaccctatgaggaaaaggaagtagtaaaagaaata
gtaaaaacggagatggaaaatgctgtttcgctgaaagttcccttggtagttgaagtgaaa
gaaggttcaaactggtatgaaacaaagtag
DBGET
integrated database retrieval system