Caldicellulosiruptor naganoensis: OTJ99_001311
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Entry
OTJ99_001311 CDS
T08720
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
cnag
Caldicellulosiruptor naganoensis
Pathway
cnag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cnag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OTJ99_001311 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnag03400
]
OTJ99_001311 (recO)
DNA repair and recombination proteins [BR:
cnag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OTJ99_001311 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OTJ99_001311 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF2387
GalA_N
DUF6334
PSV_ORF131-like_dom
Motif
Other DBs
NCBI-ProteinID:
WAM30559
UniProt:
A0ABY7BCJ8
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All DBs
Position
1330412..1331146
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AA seq
244 aa
AA seq
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MKFVKAKGIVLKDINFEESSKVLTILTAEIGKIQALSKNCRRTLSPLSAVSQPLIYSEFV
FTKAKDIYSISSASVIESFFDLTQNVDLTIYSSYLIELVDNFIELEQKNEDVLRLLLNSL
YMLKKGAEPETICRIFEIKILIFTGFFPQFTQCVKCHKSSLNQIFFSFKNAGVVCPECKE
EDDVKISLETVEKILIIAATDLKKLSKIKIDKELNTILKNLMITYIKLVLQKDVRILDFF
RFIK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgtaaaagcaaagggtattgtgctaaaagacataaattttgaagaatcaagt
aaggttttgaccattttaacagccgagataggaaagattcaagcactttctaagaattgt
agacggactttaagtcctttaagtgccgtttcgcaaccgctaatatattcagaatttgta
tttacaaaggcaaaagatatttactctatatcatctgcaagtgtaattgaatcatttttt
gacctcactcaaaatgtcgaccttactatttattccagttatttaatagaacttgtggac
aattttatcgaattggaacagaagaatgaagacgtgttgagacttttgttaaactcgttg
tacatgctgaaaaagggagcagagcctgagactatttgcagaatctttgaaattaaaatt
ttaatttttacaggattttttcctcagtttacccagtgtgtaaaatgtcacaagtcaagt
ttgaatcagatttttttctccttcaaaaatgcgggagttgtttgcccagaatgtaaggaa
gaagatgacgtgaaaataagtcttgaaactgttgagaagatactaataattgcagcaaca
gatttaaaaaagttaagcaaaataaaaattgataaggaattaaatactatactgaaaaat
ttgatgataacgtatataaaattggttttacagaaggatgtcaggattcttgattttttt
agatttataaaataa
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