Caldicellulosiruptor naganoensis: OTJ99_001428
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Entry
OTJ99_001428 CDS
T08720
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
cnag
Caldicellulosiruptor naganoensis
Pathway
cnag00550
Peptidoglycan biosynthesis
cnag01100
Metabolic pathways
cnag01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
cnag00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OTJ99_001428 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OTJ99_001428 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cnag01011
]
OTJ99_001428 (mrdA)
Enzymes [BR:
cnag01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
OTJ99_001428 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
cnag01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
OTJ99_001428 (mrdA)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WAM30659
LinkDB
All DBs
Position
complement(1444210..1446315)
Genome browser
AA seq
701 aa
AA seq
DB search
MKILLIQKLREKNVFNRWTFLYILFITLSFILIMRLAYLQIVKGDYYYEISEKRIMQKAN
LEAPRGIIFDRKGRPLADNRPAYVLQILKTQQLRTEKDKKEFTKKIIEIVKILNKNNDKI
LNQFKIGINPIRFDFGIRDKKLAKKVEQQWKKDRNIPLSYSAEQAFNLLKKRFYIPNNLD
LNLAIQVMAVEDMLFYNYYQMYQPVTIAVDISMKTIAEIEERRKEFSFVNIEAKAVRTYK
DAVYNAFVVGRVGRITQQQYEELKDKGYSADSIIGVEGIEKRYEKYLRGKDGIQLIEVDK
FGRINNIRVEKEPVKGANVYLTIDSKLQRVAYNSLKKVLEKIRNGEFGERFPKATAGAAV
VIDVKTGNVLALTSYPSYDPNIFIKGITINEWNKLINDPNRPMFNRAIAGVYPPGSTFKI
LTAIAGLQEGVIKPTEKILDTGRYMYYAKSGFMPACWLWNRYRRTHGWVDVVDALKVSCN
VFFYETGRRLGIDRIDRYANLFGLGGKTNIQLDGESNGIFANEENKKKIFNQPWYPGDTV
LAAIGQSINAFTPIQMASFIATVANGGTRYQVNLIDKIVDAKGKVIYKSKPKVLSRVNMS
LATKRAVFEGMKSVTSEEGGTARQAFKDLPFTVAGKTGTSQYSNSSDAHGWFVGFAPYDD
PQIAFAIVLENGGHGSYAAYVARDIIDSYFNLQNPQDSTSH
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaagatattacttatccagaagctgagagaaaaaaatgtatttaatagatggactttt
ttatacatactttttataactttgagtttcatccttattatgcggcttgcatatcttcaa
attgtaaaaggtgactattattacgagatttcggaaaagagaattatgcaaaaagcaaac
ttagaagctcctcgagggataatcttcgatagaaaaggaaggcctcttgctgacaacaga
cctgcctatgttttgcagatattgaaaactcaacaactccggacagaaaaggataagaag
gagtttacaaagaagataattgaaattgtcaagattttaaacaagaacaatgataagata
ttaaatcagttcaagattggcataaaccctataaggtttgactttggtataagagacaaa
aaacttgctaaaaaagttgagcagcaatggaaaaaggacagaaatatcccgttaagttac
tctgctgagcaagcatttaatctacttaaaaaaagattttacatccctaacaatcttgat
ttgaacttagccattcaagttatggcagttgaagatatgctattttataattattaccaa
atgtaccaacctgttacaatagcagtggatatttcaatgaaaacaattgctgaaatagaa
gaaaggagaaaggaattttcttttgtaaacatagaagcaaaggcagtgagaacatacaag
gatgcagtatacaacgcatttgttgtaggaagagttggtagaatcacacagcaacagtat
gaagaattgaaagacaaagggtattcggcagatagtataattggagttgagggaatagaa
aaaagatatgaaaaatatctacgtggcaaagatggaatacaacttatcgaggttgataag
tttggaaggataaataatatcagagttgaaaaagagcctgtaaaaggagcaaatgtatat
cttacaatcgatagtaaattacaacgggttgcttataactcgctcaaaaaggtattagaa
aaaataagaaacggagaatttggtgaaaggtttccaaaggcaacagccggagcagctgtt
gtgattgatgtaaaaacaggaaatgttcttgcgcttacaagctatccttcttatgaccca
aatatatttataaaaggaatcacaataaacgagtggaataaactaataaatgatcctaac
agaccaatgtttaacagagctattgcaggtgtttatccacccggttcaacctttaagatt
ttaactgcaatagcaggcttgcaggaaggtgttataaaacccaccgaaaagatactggat
acaggccgatacatgtactatgcaaaatccggtttcatgccggcatgttggctatggaat
agatatcgtagaacacatggatgggttgatgttgttgatgcgttgaaggtttcatgcaat
gtgtttttttatgaaactggtagaagacttggaattgataggattgacaggtatgctaat
ttgtttggactgggcggcaaaacaaatatccaacttgatggggagtctaatgggattttt
gcaaatgaggaaaacaagaaaaagatattcaaccaaccatggtatcctggtgacacagtt
ttggctgcaattggtcagtcaattaatgcatttactcccattcagatggcaagttttatt
gcaactgttgcaaacggtggaacaaggtatcaggtaaatctaatagataaaattgttgat
gcaaaggggaaagttatttacaagtcaaagccaaaggttttgagcagggtcaatatgtcg
cttgctacaaaacgagcagtatttgaagggatgaagagtgtcacaagtgaagaaggaggt
acggcaagacaagcgtttaaagatttgccttttactgttgcaggaaagacaggtacttcg
cagtattctaactcttcagatgcacatggttggtttgttggctttgcaccctacgatgat
ccgcagattgcctttgctattgtgttggaaaatggtggacatggttcatacgctgcatac
gttgcaagagatataatagacagttatttcaacttacaaaatccacaagacagtacctcg
cattaa
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