Cupriavidus nantongensis: A2G96_03015
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Entry
A2G96_03015 CDS
T09823
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cnan
Cupriavidus nantongensis
Pathway
cnan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cnan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A2G96_03015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnan03400
]
A2G96_03015
Enzymes [BR:
cnan01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A2G96_03015
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A2G96_03015
DNA repair and recombination proteins [BR:
cnan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A2G96_03015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AMR76794
UniProt:
A0A142JFD2
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All DBs
Position
1:662538..663428
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AA seq
296 aa
AA seq
DB search
MPELPEVEVTRRGLLPHVVGRRIAAVTVRHRGLRWPVDPGLETCLAQRLVRRIERRGKYL
LLECVSADAAQPVGWLLVHLGMTGTLRVLPEAPPPGVHDHFDLVLDAGPGAASAAMPGQQ
PGTIVLRFRDPRRFGAILWTTLPEAELPSHPLLSTLGIEPFDPAFDGAWLYRHTRGRSAA
IKTVLLSGAIVVGVGNIYASESLFRAGIHPTTPAGRLSRARCDRLAQAVRDTLAQAIERG
GSTLRDFVGSDGASGYFQLDCFVYDRAGLPCKVCAKPVRQIVQGQRSTFYCTNCQH
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgcccgaggtcgaggtgacccggcgcggcttgctgccgcatgtggtgggg
cggcgcatcgccgcggtcacggtacgtcaccgcggcctgcgctggccggtcgaccccgga
ctcgaaacctgcctggcccagcgcctggtgcgccgcatcgagcgccgcggcaagtatctg
ctgctggaatgcgtcagcgccgacgcggcgcagccggtcggctggctgctggtgcatctg
ggcatgaccggcacgctgcgggtgctgcccgaggcaccgccgccgggcgtgcacgaccac
ttcgacctggtgctcgacgccgggccaggcgcagcgtcggcagcaatgccaggccagcag
ccaggcaccatcgtgctgcgcttccgcgatccgcgccgcttcggcgccatcctctggacc
acgctgccggaggcggaactgccctcgcatccgctgctgagcaccctcggcatcgagccc
ttcgatcccgccttcgacggcgcctggctgtaccgccatacgcgcggccgcagcgcggcg
atcaagaccgtgctgctgtccggcgcgatcgtggtcggcgtgggcaatatctacgcgtcc
gaaagcctgttccgcgccggcatccacccgaccaccccggccgggcgcctgagtcgggcg
cgttgcgatcggctggcgcaggcggtgcgcgacaccctggcgcaggcgatcgagcgcggc
ggcagcacgctgcgcgacttcgtcggcagcgacggtgccagcggctacttccagctcgat
tgctttgtctacgaccgcgccggcctgccgtgcaaggtgtgcgccaaaccggtgcgccag
atcgtgcagggccagcgttccaccttctattgcaccaactgccagcactga
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