Cryptococcus deneoformans B-3501A: CNBA0690
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Entry
CNBA0690 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K12855
pre-mRNA-processing factor 6
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNBA0690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnb03041
]
CNBA0690
Spliceosome [BR:
cnb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CNBA0690
Complex C
U5 SnRNP specific factors
CNBA0690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
PRP1_N
HAT_PRP39_N
TPR_19
TPR_16
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_6
TPR_21
ANAPC3
FAT
ARM_TT21
ARM_TT21_N
ARM_TT21_2nd
Cdc6_lid
TPR_12
Motif
Other DBs
NCBI-GeneID:
4933320
NCBI-ProteinID:
XP_778066
LinkDB
All DBs
Position
1:complement(201355..204619)
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AA seq
942 aa
AA seq
DB search
MSNVGTVKHIPKEVRYNFLNMAAPASYVAGLGRGASGFTTRSDIGPARAGPSAEVVAEAQ
ARRGEEEIPDPDAFQDPDDERNLFAGTVYEADDEEADRVWDSVDARMDARRKARRDAAEA
KAAAEERARNPKLQTQFADLKRSLSSLNDADWDAIPEAGNLTGKRRKANLRLEENQNGRS
YNVSDTVIADAVKRNAMVGELDPAEAGIGIDGTETDLVSIGNARDRVLSLQLDQATRDAS
NGSSTSIDPKGYMTALNSQIVQTDAQIGDIKQARQLLQNLIQSNPKHAPGWIAAASLEVH
AKKMVAARKIIAEGCEKCPKNEDVWFHAAELNTPENAKVILGRAIQHVPQSVKIWLKAAS
LETDINAKKRVLRKALEFVPNSVGLWKETVNLEDDPEDARVLLTRAVEVIPNSVELWLTL
ARLETPENAKQVLNSARKRIPTSHEIWIAAGRLAEQSPSAVAVKPEVKMEDEAEYEAEQR
KKLAQQVNKLMAGAVNSLRKNQVILSREQWLQEAEKCEQDGSPLTAQAIVKATIAQDVEE
EDRRSVWIEDAERATKGGFYEVARACYAVTLEAFPNTPSVWRKAAEFEKAHGTPDAVQEI
LAQGSQHCPHAEVLWLMAAKEKWVGGDIPGAQAILAEAFKQNEDSESIFLAAAKLAAETG
EMEAAIQILEKAKAQADTERVWMKSAVLLRQLGKLDEALSTLEVAIKKFASFDKLHMIRG
QIYESRNEVALARNAYAQGCRSCPKSIPLWILSARLEEKAGVTIKARALLEKARLHNPKN
DELWAESIKIEERTGSPQQAKSVLARAMQECPASPLLWSMAIFMETPQQRKGRSVDAIKK
AGEHPAVILAVARNFWSERKIEKTRQWMANAITADEDWGDAWGYWLKFERQHGEKERQEA
VVEKCIAASPRHGPVWQSVSKDLANVGKSTKEILELVADKLE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgtcggcacagtgaagcatattcccaaggaagtgcgatacaacttcctcaac
atggccgctccggcgagctatgttgctggtcttggtcgaggtgcttcaggtttcacaact
cggtccgatattggtcccgcccgagctggtcccagtgcagaggttgttgcggaagctcaa
gctcgccgtggtgaagaagaaatccctgatccagatgctttccaagatccggacgacgaa
aggaatctgtttgctggtacagtctacgaagcggacgatgaagaggccgacagggtgtgg
gacagtgttgatgccagaatggatgcgagaagaaaggccagacgagacgcggcagaagcg
aaagcggcggctgaagaacgtgctcgcaatcccaaacttcaaacgcaatttgcagacttg
aaacgatctctatcgagcctcaacgatgctgattgggacgccatccctgaagcaggaaac
ttgactggaaaaaggagaaaggccaatttgcgattggaggaaaatcagaatggaagaagc
tacaatgtcagcgacactgtcattgcagatgccgtgaagagaaatgccatggtaggagag
ttggatcctgcagaggctggtattggtatcgatggtaccgaaacggatcttgtatctatc
ggtaatgccagggaccgagtattgtcgctgcagcttgaccaagccacaagagacgcctca
aacggctcttctaccagcatcgaccctaaaggctatatgaccgctcttaacagtcagatt
gttcaaacagacgctcaaattggtgatattaagcaagctcgccagctcttgcaaaacctc
attcagtctaatcccaaacacgccccaggatggatcgccgccgcttccttggaagtacac
gcgaagaagatggtcgctgccaggaagattatcgctgaaggatgtgagaagtgtccgaaa
aacgaggatgtttggttccatgccgctgaactcaacacaccggagaacgcgaaagttatc
ttgggtcgagctatacagcacgttcctcaatctgttaaaatttggctcaaggctgcttct
ctagaaacagacataaacgccaagaagcgcgttctccgaaaagcccttgaattcgttccc
aactctgtggggttgtggaaggagactgtcaacctggaagatgatcctgaagacgcccgc
gttctccttacccgtgctgttgaagtcatccccaactctgtggagctctggcttactctg
gcccgtcttgaaactcctgaaaacgccaagcaggttctcaattctgcgcgcaagcgtatc
cctacctctcacgaaatctggatcgctgccggtaggcttgctgagcagtcaccttccgcc
gtggctgtcaagccagaggtcaagatggaggacgaagcggaatacgaggctgagcaaaga
aagaagcttgctcagcaggtcaacaaactcatggctggtgcagtcaattcattgcgcaag
aatcaggtcattctttcgcgagaacaatggttgcaagaggccgagaaatgtgaacaggac
ggctcacctcttacagcgcaagctatcgtgaaggctaccatcgctcaggacgtcgaggaa
gaagataggagatctgtctggattgaagatgcggagagggcgacaaagggtggattttac
gaggtcgcgagagcttgttacgccgtcactctcgaggcttttcctaatactccatcagtc
tggagaaaagccgccgagttcgaaaaggcccatggcacacccgatgctgtccaagaaatt
ctcgcccaaggatcccaacactgtcctcatgcggaggttctctggcttatggctgcgaaa
gagaagtgggtcggcggcgatatccccggtgctcaagccattcttgccgaagctttcaaa
caaaacgaagattccgaatctatcttccttgctgccgccaagctagcagctgagaccggc
gagatggaggctgctatccagatccttgagaaggccaaggcacaggcagacacagagaga
gtctggatgaagtcagcggtactgttgaggcaattgggcaagttggacgaggctctttca
accttggaagttgcaatcaagaaattcgcttcctttgacaaattgcacatgatccgaggg
cagatctacgagtcccgtaatgaggttgcgcttgcgcgaaatgcatatgctcaaggatgc
cgatcatgtccgaagagtatcccattatggatcttgtcggctcgtctggaggagaaggcg
ggtgtgacgatcaaggcaagggcattgctcgaaaaggcgaggttgcataatcccaagaat
gatgaattatgggcggaaagtatcaagattgaagaacgaacgggcagcccacagcaagcg
aaatctgtccttgctcgagcaatgcaagaatgccccgcctctcctcttctttggtccatg
gccatcttcatggagactcctcaacaaagaaaaggtcgttccgttgacgcaatcaaaaag
gccggcgaacatccggccgtcatcttggcggtcgcgagaaacttctggagtgaaaggaag
attgaaaagacgagacagtggatggccaatgctattaccgccgatgaagattggggagat
gcctggggttattggctgaagttcgagaggcaacatggagagaaagaacgtcaagaagcg
gtcgttgaaaaatgcatcgcggcatcaccacgccatggtccggtatggcagtcggtatca
aaggatttggccaatgttggcaagtctacaaaagagatactggagttggtcgcggacaaa
ctggaataa
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