Cryptococcus deneoformans B-3501A: CNBA1660
Help
Entry
CNBA1660 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CNBA1660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnb03021
]
CNBA1660
03019 Messenger RNA biogenesis [BR:
cnb03019
]
CNBA1660
Transcription machinery [BR:
cnb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CNBA1660
Messenger RNA biogenesis [BR:
cnb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
CNBA1660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pcf11_C
CID
zf_PCFS4
zf_UBZ
DUF7340
zf-Tbcl_FmdE
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
4933417
NCBI-ProteinID:
XP_778166
LinkDB
All DBs
Position
1:<461195..>463246
Genome browser
AA seq
611 aa
AA seq
DB search
MAYQAHQAYQQAPYYPPPPVQPTTDVFRRQYADRLRALTFNSRPIIQDLSMLAMAARDRN
DWNGMQAVVEEIELAVLRALPQQKLPLLYLLDSISKNVGPPYTTRLLQAIVPRLYIKTYR
EVDGVTKTKMEEMIGLWRTGGPGGSELYGSHVREQVERELFGSAGIQNFKVPNRQQVQVL
LNAALDNKRREVAMRPGDVVLGRQMNALLGIGELLSTTNVQPQELSMIVEQLKSMAPPSV
APTPTQVSVTPSWGPSPSVNDLAPSNLPPFPPKLPAVNGNGYTNVALPPFPSNIPTPLGT
ISTPPVTSSQTPIPGNQRSLTPVMAPASLAPVSSIVPSVPSIPVDVARILQTLNKSGIGS
QPQTPDVDRGTPGPNMVPAIEAYEDMILRLDIKLKSIDLNAPHKLSFAHLSHRCQQCGMR
FPSANAAFDAHMDWHFRRNKKERESGGRGAHRRWLPRVEQWINDATTLPSTAASSSQTEK
ATVSAERLAQLRQKWVKVPQDSKKAASVCPVCKEAFRAEWSDSEEEWIWKNALAINGVFY
HATCRAEQTSALKRLKAADPNRRTSSSASPRTTPSNEGLKPEAQKRKVEGMDIEHEEGSK
RVKVEEIVGDI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcctatcaagcccatcaagcctatcaacaggccccatattaccctccgcctcctgtc
cagcctacaactgatgtatttcggaggcagtatgcagatagattgagggccctcacattc
aactcgaggcctattattcaagatctgtcgatgttagcgatggcggcacgagatcgcaat
gattggaacggaatgcaggctgttgtggaggaaatagagttggctgtcttgagagctctt
ccccaacagaagcttcctttgctttatctgcttgattccatctccaagaatgttggaccc
ccttatacaacccgtctgcttcaggcaatcgtacctcggctatatataaagacgtatcgt
gaggtcgatggcgtgacgaagacaaaaatggaagaaatgattggtctctggcgcactgga
gggcctggcggttccgagttgtacggctctcatgtcagagaacaggtggaaagggaatta
tttgggtcagcaggcattcaaaacttcaaagttcccaatcgacagcaagtccaagtgctt
cttaatgcagctttggacaataaacgacgtgaggtggcgatgagacctggtgatgtggtt
cttggtcggcagatgaatgcattgttgggtatcggggagctgcttagcacgacgaacgta
caacctcaggagctgagtatgatagtagagcagctgaagtcgatggcgcctccatcggtg
gctcctactccgactcaagtatctgtcacaccttcttggggaccctccccctccgtgaat
gacttggccccctcaaatctcccgccctttcctccaaaacttcctgctgttaatggcaat
ggatacactaacgttgccttaccaccgttcccctcaaatataccaacaccactcggaact
atttccacacccccagtgacaagttcccaaactcctattcctggcaaccaacgctcgtta
actcccgtcatggcacctgcgtcccttgctcctgtgtcctctattgtaccatctgtacca
agtattcctgttgatgtcgctagaattcttcagactttaaacaaatcaggaatcggtagc
caaccgcagacccccgatgttgacagagggacgccaggaccaaatatggttccagcaatc
gaggcttatgaggatatgattttacgattggatataaaactaaaatcaattgatctcaat
gccccccataaattgtctttcgctcatctttctcaccgttgtcagcaatgtggtatgaga
tttccttcagccaatgccgcatttgatgcccacatggattggcatttcagaagaaataag
aaagagcgcgagtcggggggaagaggtgcccatcgaaggtggcttccgcgggttgagcaa
tggatcaatgatgctaccactcttccatctaccgcggcgtcatccagtcagactgaaaag
gctactgtctcagcagagcggttagcgcaactgcgacaaaaatgggtgaaggtgcctcaa
gattccaaaaaggctgcgtcggtgtgcccagtgtgcaaagaagcttttagagcagaatgg
tctgatagtgaagaagaatggatatggaaaaacgcattagccatcaatggcgtcttttat
cacgcaacttgtcgagcggagcaaacatctgctttgaaacgcctcaaagctgctgatccc
aatagacgcacatcttccagtgctagtcctaggacaacaccgtccaatgaaggcctgaag
ccagaagcgcaaaagagaaaggttgaagggatggatatagaacatgaagagggctccaaa
agagttaaagtggaggaaattgtgggtgacatataa
DBGET
integrated database retrieval system
