KEGG   Cryptococcus deneoformans B-3501A: CNBA5220
Entry
CNBA5220          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
cnb  Cryptococcus deneoformans B-3501A
Pathway
cnb03018  RNA degradation
cnb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CNBA5220
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CNBA5220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cnb03019]
    CNBA5220
   03041 Spliceosome [BR:cnb03041]
    CNBA5220
Messenger RNA biogenesis [BR:cnb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CNBA5220
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CNBA5220
Spliceosome [BR:cnb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    CNBA5220
SSDB
Motif
Pfam: LSM DUF150_C Gemin6
Other DBs
NCBI-GeneID: 4933785
NCBI-ProteinID: XP_777825
LinkDB
Position
1:1441317..1441763
AA seq 95 aa
MASIESYVDHTVQVILQDGRVIVGKLKGYDPRTNLILSDSVEREFSMDQGVEMIPLGLYV
IKGDNVAVVAELDEEKDSTINYNDIRAEPLAELRY
NT seq 288 nt   +upstreamnt  +downstreamnt
atggcctcaatcgaaagttatgttgaccacactgtccaagtcattttgcaggacggccgc
gttatcgttgggaagctaaaagggtatgatccgcgcacgaacctcatcctctccgactcg
gtggaacgtgaattttctatggaccaaggggttgagatgattccgttgggcctatacgtg
ataaaaggagacaatgttgcggtagtggcagagttggatgaggagaaagatagcaccatc
aactacaacgacatccgggcagaacctctagccgaattacggtattga

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