Cryptococcus deneoformans B-3501A: CNBA5380
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Entry
CNBA5380 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03022
Basal transcription factors
cnb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CNBA5380
09124 Replication and repair
03420 Nucleotide excision repair
CNBA5380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnb03021
]
CNBA5380
03036 Chromosome and associated proteins [BR:
cnb03036
]
CNBA5380
03400 DNA repair and recombination proteins [BR:
cnb03400
]
CNBA5380
Enzymes [BR:
cnb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CNBA5380
Transcription machinery [BR:
cnb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CNBA5380
Chromosome and associated proteins [BR:
cnb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CNBA5380
DNA repair and recombination proteins [BR:
cnb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CNBA5380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
nSTAND3
YtxC
DUF4932
Motif
Other DBs
NCBI-GeneID:
4933801
NCBI-ProteinID:
XP_777841
LinkDB
All DBs
Position
1:1482295..1485493
Genome browser
AA seq
799 aa
AA seq
DB search
MKFMLGDLPVLFPYDRLYPEQYSYMADLKTTLDAGGHCVLEMPSGTGKTVSLLSLIIAYM
QFYPNKRKLIYCSRTVPEIEKALAELKRLMMYRAEMGANDGDFRGLGLTSRRNLCLHPEV
SKEKKGKIVDSRCRDLTSAFACEKGRADPGSVPLCSFHEELNNYEPGNLIPPGVYTLDDV
KKYGQEKGVCPYFTIRRMLPFLDVMIYSFHYLLDPKVAEQVSAEMSKESIVIFDEAHNID
NVCIESLSIDLTRPMLDSAARSVNKLSDKIAEIKETDAKKLEDEYAKLVEGLQEANERVE
DDDMLVSPVLSKDMVDEAIPGNIRKAEHFIAFLKRFIEYLKTRMRVLHVVAETPQSFLAH
LKEITYIDQRPLKFASERLTCLVRTLELTNLEEHSALQKVAGFGTLVATYEKGFLLILEP
YETEHATVPNPIFHFTCLDPSLAIAPVFDRFASVVITSGTISPLDMYPKMLQFQPVMEQS
YPMTLTRNAFLPMVITRGSDQVPISSRFEVRNDPAVVRNFGSILIEMARTVPDGVVAFFP
SYLYMESIVSAWYDMGILSEVWKHKLLFVETPDAMETSIALRNYREACNNGRGAVLLSVA
RGKVSEGIDFDHNYGRAVIMFGIPYQYTESRILKARLEFLRDNHRIRENDYLTFDAMRHA
AQCVGRVLRGKTDWGLMVFADKRFARQDKRAKLPKWINSYITEAHSNLSTDVAVSLAKKF
IRQISQPFDHTQTGISLWTLEDIEERQRRDKDEAERVEMTQSAAIRESAAEENDHAPLAS
DYMEIDDAELAGLSIPIDE
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatgcttggcgatcttcccgttctgttcccttatgatcggctgtatcccgag
caatactcctacatggctgacctgaaaacaacattggacgcaggaggacattgtgtactt
gaaatgccctcgggaacaggaaaaaccgtatccctgctatctctgatcattgcctatatg
caattttaccctaataaacggaaactgatttactgctcacggacagttccggaaatagag
aaggctttagcggaactcaagcgattgatgatgtaccgcgcagagatgggggcaaatgat
ggtgatttcagaggactgggattgacgagtcggcggaatctttgtcttcacccggaagtc
agcaaagagaaaaaaggcaaaatagttgattcgcggtgcagggatctcacctcagcgttc
gcttgtgaaaaagggagggctgacccggggagcgtaccattatgtagtttccatgaggag
ttgaacaattacgagcccgggaatcttatacccccaggcgtctatactctggatgatgtt
aagaagtatggccaagaaaagggtgtctgtccgtactttacgatcagaagaatgttgcct
ttcctcgacgttatgatatactccttccattatcttctggatccaaaggtcgcagagcag
gtgtccgctgaaatgagcaaggagagcattgtgatatttgatgaagcacacaacattgat
aatgtctgtatcgagtccctatccatcgacttgacgaggccaatgttggattcggccgca
agaagcgtcaataaacttagtgacaagattgcggaaatcaaggagactgatgcgaagaag
ctggaggatgagtacgcaaaactagtcgaaggtctgcaagaagccaacgagcgagtggaa
gatgacgacatgctcgtcagtccggttctgtcaaaagacatggtggatgaagctatacct
gggaacattcgaaaggcggagcattttatagctttcctcaaacgattcattgaatatctc
aagactaggatgcgcgtgctgcatgttgtagcagagacacctcaatcattcctagcgcat
ctgaaagaaataacatatattgatcaacggcctctcaaatttgcttccgagcgccttact
tgtttggttcgcacattggaattgacaaacttggaagaacattctgcgctgcaaaaggtt
gctggttttgggacccttgttgccacttacgaaaaaggattcctactgatcctcgagcct
tacgaaaccgagcacgccacagtgcctaaccccatttttcatttcacttgtcttgaccca
tcgctcgctatagcgcccgtctttgaccgttttgcctcagtggtcatcacttccggtacc
atatctcccctcgacatgtaccccaaaatgttacaattccaacctgttatggaacagtcg
tatcctatgaccctcacccgaaacgcttttttaccaatggttataactcgaggcagtgat
caagtcccaatttcctccagatttgaggttagaaatgatcctgcagtcgtacgaaatttt
ggaagcatcttgattgaaatggcacggactgtccctgatggagtggtggcattctttccc
agttatctatatatggaatctattgtttcagcttggtatgacatgggcattctaagtgag
gtgtggaagcataagctactgttcgtggaaactccagacgccatggaaacgagcatagcc
ctcaggaattatcgcgaggcatgtaataatggaagaggggctgtccttctctctgtggcg
cgaggaaaggtgtccgaaggaattgatttcgaccacaattatgggcgagctgttattatg
tttggcattccctatcaatacacggaatcacgtattctcaaagctcggctggagtttctt
cgagataatcataggatccgagaaaacgattatcttactttcgacgctatgcgacatgct
gcccaatgcgttggtcgtgtgttgcgagggaagaccgactggggtctgatggtctttgcg
gacaagcgatttgcgagacaagacaagagggcaaaacttccgaaatggatcaacagttat
attacggaggcccattccaacttgtccacggatgtggctgtttcgctggccaaaaagttc
atacgtcaaatctcgcaaccatttgatcacacacagacagggatatctttatggactctt
gaggacatagaggagaggcaaagacgggataaggatgaagctgaaagggtcgaaatgaca
caatcagcagcaattagagagagtgccgccgaggagaatgaccatgctccgcttgctagc
gattacatggagattgacgacgccgagttggcggggctgtctatacccatagatgaataa
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