Cryptococcus neoformans var. neoformans B-3501A: CNBA5740
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Entry
CNBA5740 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
cnb
Cryptococcus neoformans var. neoformans B-3501A
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cnb03009
]
CNBA5740
04121 Ubiquitin system [BR:
cnb04121
]
CNBA5740
Ribosome biogenesis [BR:
cnb03009
]
Eukaryotic type
90S particles
Other 90S particles
CNBA5740
Ubiquitin system [BR:
cnb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
CNBA5740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Sof1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Gly_transf_sug
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_NUP159_NUP214
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
4933838
NCBI-ProteinID:
XP_777877
LinkDB
All DBs
Position
1:complement(1578627..1583140)
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AA seq
1382 aa
AA seq
DB search
MKIKTISRSLDDHLPSSSSAPHPLSHNLAPHLHPFAKPREYTRAVTAVKMERMFAKPFVD
ALGGHQDGVYCLGKDSRRAGVVAGGGGDGEVIVHSLGLRRPLLKIPGAHRGMVSGICWTS
EAQDRRRGLITCGKLDGTIKLWRSEAFAPGLRDKDAFQGNEFGLGQGEGSGFLDQAGAIG
ESGYDEEEGGGLSLDSAKRDALGQNLEPTMTFTSKNGLNGIDHHRTDAVFATASNTVQIW
DEQRTAPLSTLQFGSSMETVSGVKFNQSETSVLASVGNDRTMCLYDIRTGKAERRIVTQF
TSNCLSWCPTLPTLLLLGSEDHNLYTFDIRNLETPNQIYKGHVGGVMGCDWSPTGEGFVS
GSYDRTVRLWNREEGKSRDVYHTKRMQRVFDVSYTPTADFVLSASDDGNVRIWKSDASKK
LGPVSTKERQAIEYRQKLVERYAREKGVREVKERRHVPQSIHNATKLKREMIEARNIKED
RRRKHSRAGREKPKAERKSELAVVVVGCVLTLCRDCGCGAAVGGAWYIECVHRWCDVCAV
YMAWCPDLSGCARRAVLLRVSVSGPISSSHSLVHLVFLPSHPLSSYPLIHIARMSLFGQI
KRHNPAKPRRSPLPTSAWDDDRRFGLSGPSAYSRWFTTLYIPLRLPFGHPSDSHSLSSGS
SLGSPRPYHAKPRTRHLKVYLPIPPRLYARIPRLNSPIRVLLLLVFSVVVGFFLLGFRKT
RQGERTWSPPFVDPDTMVITPEEAAMVWEWEILSGHYPSIEHPPDHLPLYPSLKNPVVPA
TLLPSPSSPTPLVAYQNRADKFPSAHLAGNGPERHYLSVWDMRESQPGFPARPMPGSILD
LDLVLEKCDLGTNKYVRDCLEFLRIGGGLDIGKRVRRGNYLTQYKQLYYEESTPSQSLSM
MPRNLKQSTGRSKTPLILPDPYDIPASFDSRDACDPLHPRIFHIFWTGPFTDKPYMAVMS
FLFTQNLGLDKPVDAVSDTASVVRGTCRPQLWLWINPGPAAAVPNPSAKREMYEQLATNP
WSAPFLHDRFRDVVKFKMWNTTEQLDGVAELKDHWRKMPIFNSGGNTYGDPMGKTEDEVN
EEIEDESGKTASPKKKGGLFEKVGSSSESDYDRLSVILSDMARFIVTHRFGGIYLDADTI
FLRDWEELWNYRGQFAYRWSWHEKYNTAVLKLHKGSALSTFLFKTALENGLDFHPMTVSR
YLKDAGLEKLLFRVPDALFDPAWLNMERYQRDRPPFPYFPEFSVFFSNDKFDTAGPQPLG
FDGFFRGAFSYHFHNFWWLPFDPSRNFPDLGHRFIKGERALRDAARSSSSDQASHLVGDD
VEPRSVLDPSQEGVEGDGDVTSREDMDDELDLSWSTVLKRSFEGFLRGERPNAYGEWLEW
GD
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaaaccatctctcgctccctggacgatcatcttccctcttcctcctctgct
ccccatcctctgtcgcacaacctcgcgcctcatctccatccttttgcaaagccaagagaa
tacacacgtgccgtcactgccgtaaagatggagcgcatgtttgccaagccttttgttgac
gctcttggtggtcatcaggacggtgtctactgtctgggtaaagactcgagacgggccggc
gttgttgccggtggtggtggcgatggcgaagtcattgtacattccttgggcttgaggaga
ccattgctcaaaatcccaggagcccataggggtatggtcagtggtatatgctggacgtct
gaggcgcaagaccgtcggagaggactgatcacctgcggcaaacttgacggcaccatcaaa
ctttggcgaagcgaggcgtttgcccctggtttgagagacaaggatgcttttcagggcaat
gagtttggtcttggacaaggtgaaggaagtggatttttggaccaggccggagcgattgga
gaaagcgggtatgatgaggaggaaggcggaggcttgtcgcttgattcggcaaagagggat
gcgttggggcaaaatcttgagcccacgatgacttttacatccaagaacggtttaaacggc
atcgatcatcaccgtacagatgcggtatttgctactgcttcaaacactgtgcagatctgg
gacgagcagaggacggcaccattaagtacacttcagtttggaagctcaatggagacagtg
tctggcgtcaagttcaatcagagcgagactagtgtgctggcaagtgtgggtaatgacaga
acaatgtgtttgtacgatatccgaacgggcaaggccgagagacgtattgttacccagttc
acgtccaattgcctctcgtggtgtcccactctccccacccttcttcttcttggctcagag
gatcacaacctctacacatttgacattcgtaacctggaaactcctaaccaaatttacaag
ggccacgtcggtggtgtcatgggatgcgactggagcccgacgggtgagggatttgtctct
gggtcctatgacagaactgtgcggttatggaacagagaggaaggcaagtcaagggacgtt
taccacaccaagcggatgcagagagtatttgacgtcagctacactcccactgccgacttt
gttctctccgcgtcggatgatggcaatgtgcgcatatggaaatcggatgcgtccaagaaa
ctcggccctgtttcgaccaaggagcgtcaagctattgagtatcgacaaaaactggtggag
agatacgcccgggagaagggagtcagggaagtcaaggagaggaggcatgtgccgcagagc
atccacaatgccacaaagctgaagagggaaatgatagaggcgcggaatatcaaggaggac
aggaggcggaagcactcacgtgctgggcgggagaagccgaaggcggagaggaagagtgag
ttggctgttgtggtggtgggatgtgtgctgacgctgtgcagagactgtggttgtggagca
gcggtagggggggcgtggtatatagaatgtgttcataggtggtgtgatgtatgtgcagta
tatatggcgtggtgtccggatctgagtgggtgcgccaggcgggctgtcctgctgcgtgtt
tcagtttctggtcccatctcatccagtcattctcttgtccatcttgtctttttgccctct
catccactatcctcttatccactcatccatatcgcccgcatgtcgctattcggccagatc
aagcggcacaaccctgcaaaaccacgccgctcacccctccccacctcagcatgggacgac
gaccgccgcttcggcctctctggcccctctgcatattctagatggttcaccaccctttac
atccccctccgccttccttttggccacccatccgactctcactccctctcctcgggctca
tccctaggatccccaagaccctatcacgcaaagcccagaactcgccatctcaaagtctac
cttcccattccacctcgcctctacgcccgtattccgcgcctcaattctcccattcgagtc
cttttgctactcgtcttcagtgtagtcgtgggcttcttccttcttgggttcagaaaaaca
agacagggtgaaagaacgtggtctcctccgtttgtggacccagatacaatggtcattaca
ccggaagaggcagcgatggtatgggaatgggagatcttgagtgggcactatccgagtatc
gaacatcctcccgaccatctcccgctttatccctccctcaaaaaccctgtcgtacccgcg
acactcctcccttccccatcgtccccaacccctttagtcgcatatcaaaaccgtgcagac
aaattcccttccgcccatttggctggaaacggccccgagcgacattatctgtctgtatgg
gatatgcgagaaagtcagcctggattcccggcaaggcctatgccggggtccatcttggat
ctggacttagtgttggaaaagtgcgatcttggcaccaacaagtacgtgcgagattgtttg
gaattcctgaggattggaggaggtcttgacatcggcaaacgggtgcgaagaggcaactat
ttgactcagtataaacagctctattatgaggaatccactccttcccaatctctctccatg
atgcctcgcaaccttaagcaatcgaccggccgatccaaaacccctcttatccttcccgat
ccctacgatatcccagcaagttttgactcccgtgacgcttgtgatcctttgcaccccagg
atattccacatattctggacaggaccgttcacagataagccatacatggctgtcatgtcc
ttcctctttactcagaatcttgggctcgacaagccagtggatgcagtgtctgatactgca
agcgtcgttcgcgggacttgtcgaccccaactctggttgtggatcaaccctggtcctgct
gctgccgtacccaatccttcagctaaaagagaaatgtacgaacagttggctacaaaccca
tggtctgcgcctttcttgcatgacagatttagggacgttgtcaaattcaagatgtggaac
accactgaacagctggatggtgtggctgaacttaaggatcactggcgaaaaatgcccatc
ttcaactcgggcggaaatacgtatggcgatccaatgggaaagaccgaggacgaagtcaat
gaagaaatcgaagacgaatcaggcaaaactgcctctcccaaaaagaagggtggccttttc
gaaaaagttggctcctcctcagaatcggactatgaccgtttgtccgtcatcctctccgac
atggcacgatttatcgtaactcatagatttggcggtatctatctcgacgctgataccatc
ttccttcgtgattgggaagaactgtggaactaccgaggccagtttgcctaccgctggtca
tggcacgaaaaatacaacactgcagtactcaagctccacaaaggctccgctctcagcacg
ttcttgttcaagacggctttggagaacggactagatttccaccccatgacggtatcgagg
tatctgaaagatgccggattggaaaagcttctattcagagtgcccgatgcgttgtttgac
ccggcttggttgaacatggaaagataccaaagagataggccgccgttcccgtacttccca
gaattctccgtcttcttctccaatgacaagtttgacaccgctggtcctcagccattaggg
ttcgatgggtttttcaggggtgcattctcctatcacttccataatttctggtggctgccc
tttgacccctcgcgcaactttccagatctcggtcatcgattcatcaaaggcgaaagagct
ttgcgtgatgccgcgcgttcttcatcctccgaccaagcttcccaccttgtcggtgacgat
gtcgagcctcgcagtgtcctcgatcctagtcaagagggcgttgaaggtgacggtgatgtc
acgagcagggaggacatggatgatgagcttgatttgagttggtcaactgtactcaagagg
agctttgaaggatttttgaggggagagaggccaaatgcttatggggaatggctggaatgg
ggggattag
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integrated database retrieval system
