KEGG   Cryptococcus deneoformans B-3501A: CNBA5750
Entry
CNBA5750          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
cnb  Cryptococcus deneoformans B-3501A
Pathway
cnb03022  Basal transcription factors
cnb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CNBA5750
  09124 Replication and repair
   03420 Nucleotide excision repair
    CNBA5750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cnb03021]
    CNBA5750
   03400 DNA repair and recombination proteins [BR:cnb03400]
    CNBA5750
Enzymes [BR:cnb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CNBA5750
Transcription machinery [BR:cnb03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CNBA5750
DNA repair and recombination proteins [BR:cnb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     CNBA5750
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom DEAD
Other DBs
NCBI-GeneID: 4933839
NCBI-ProteinID: XP_777878
LinkDB
Position
1:<1583379..>1586417
AA seq 866 aa
MSEPSSPASSLDFFESDASADSDYDEAPRRTRKQPSKKYGARHGTSTPTASGSGSGTKIK
INLSSLQRRAVEGNTAVEQEEEGDEDEEGYFDGLIGKRGVDLSGQTLKGDHSLRPLWVDD
RGNIIVEAFAPFAKQAQDFLVAISEPVSRPALIHEYRITKPSLHSAMSIGLETKVIIEVL
SRLSKTPLSPRLVARIEEWTASFGKVRLVLKDNRYFLETSVPEFLQKLMNDEVIKECMVH
REEVTGPTVFGAEEGARPRRDFAIPGTEEARRRERGEDAEQTRENDAVLGAVIGISEADE
MDDEDDKVHSFEVSGERMEDVRRRCKDIDLPALEEYDFRNDTINPNLDIQLKPMTVIRPY
QEMSLAKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSALVLCTSAVSVAQWKQQFL
HFSNISERQICAFTQGEKEMFSTSAGIVISTYSMIAKTGKRAHDAEKMMQFLRSREWGFL
LLDEVHVTPADMFRKCINNFKVHAKLGLTATLVREDDRIGDLGYLIGPKLYEANWMDLAK
NGHIATVQCAEVWCPMTPEFYREYLRNPSRKRILLHAMNPNKIQACQFLINYHESRGDKV
IVFSDNVFALEAYAKKLGKSFIHGGTPEGERLRILSRFQHDPQLNTIFLSKVGDTSIDLP
EATCLIQISSHFGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMFYSSKRQGF
LIDQGYAFKVITELHGLHSMPNLVFASKDEQLSLLESVLNQGDAAAETADHYMRLNGGKH
LKRIAGTQPSTSGTTVQRFMAPLEHLSGGQNISYREQNKSVNKELSREVRQNKRAGGSSS
GKDSHSIFKKRKTELAAAKKQRETGF
NT seq 2601 nt   +upstreamnt  +downstreamnt
atgagcgaaccatcttctccagcttcatccctcgatttctttgagtcggacgcttcagca
gactccgactacgatgaagcaccacgccgcactcggaagcagccttccaagaaatatgga
gcccggcacggtacatccactcccacagcttcaggctcaggctctggtacaaaaattaag
ataaacttgtcctctctccaacgacgggcagtggagggcaataccgctgttgagcaggaa
gaagaaggagacgaggatgaagaagggtattttgatggtttaattggtaaacgaggagtg
gatctttcaggccaaacgctgaaaggtgatcattctttgagaccgctttgggtagatgat
cgcggtaatattattgttgaggcctttgctccctttgcaaagcaagcgcaagatttcctg
gttgccatttccgagccagtatctcggcccgcccttatacatgaataccgcataaccaag
ccttctttacattctgccatgtcaattggtcttgagaccaaggtcatcattgaggtcctc
tctcgtctgagcaagacacccctttcaccgcgacttgtcgcgcgaatagaagaatggacc
gcatcgtttggtaaagtccggcttgtattgaaggacaaccgatacttccttgaaacgagt
gtccccgaattcttgcaaaaactgatgaacgatgaagtcatcaaggaatgcatggtgcat
cgtgaagaggtaacaggtcctactgtatttggagcggaggaaggtgctcgtccacgacga
gactttgccattcctgggacagaagaagctcgaagacgagagaggggtgaagatgccgaa
cagactcgtgagaatgatgctgtcttgggtgcagtgattgggattagcgaggcagatgag
atggatgatgaagatgacaaagttcattcgtttgaggtgtctggcgagcggatggaggat
gttcgaagacggtgcaaggatatcgatcttcctgcattggaagagtacgatttcagaaat
gacacgatcaatcccaatctcgatatacagttgaagcccatgacagtcatcaggccgtat
caggagatgagtctagccaaaatgtttggtaacggtagagccaggtcaggtatcattgtc
ttaccttgtggagcgggaaaaacgctggtgggcataactgcggcatgtacgatcaagaag
agcgcgttggtgctctgtacttctgctgtatcggtagcccaatggaagcaacaattcctt
cacttctccaacatctcggaacgacagatctgtgccttcacccagggcgaaaaagaaatg
ttcagtacgtcggcgggcatcgtcatctcaacctactccatgattgccaaaactggcaag
cgagcgcatgatgcggaaaagatgatgcagttccttcggtccagggaatggggattttta
ctgttggatgaagtgcatgtgactccggcggatatgttcagaaaatgtatcaataatttc
aaagtgcatgccaagttgggtctcactgcaacgctggtaagggaggatgataggattggg
gatttgggatacttgattggtccaaagttgtacgaagccaattggatggatctcgctaaa
aatggccatattgccactgtccagtgtgccgaagtttggtgccccatgactccagaattt
tatcgcgaatatttacggaatccttctcgcaaacgcatccttttgcacgccatgaacccg
aacaagattcaagcatgtcagttcttgatcaactatcatgagagccgaggcgacaaggtg
atcgtattttccgacaatgtgtttgcactcgaggcgtacgccaaaaagttgggcaagtct
tttattcacggcgggacgcctgaaggcgaacggttgcggattctttcgcgattccaacat
gacccccagctgaacaccatcttcctctccaaggtcggtgatacttctatcgacttgcct
gaagctacttgcttgatccaaatatcttcccattttggttctcggcgacaagaagctcag
cgattgggtaggattctgagggcaaagcgaagaaatgacgagggtttcaacgcctttttt
tattcgcttgtttccaaagatactcaggagatgttctattcctcgaagcggcaaggattc
ttgattgaccaaggttacgcgttcaaagtgatcaccgaacttcacggtcttcatagcatg
cccaacctcgttttcgcttccaaggacgaacagctgtcattgctagagtcggtactgaac
cagggtgatgccgcggcagagacggcggaccattatatgaggttgaatgggggtaagcat
ctcaagaggattgcgggcactcagccgagtacgagtgggacgacggtgcagaggttcatg
gcaccgttggagcatttgagtggagggcagaatatcagttatagagaacagaacaagagt
gtcaacaaggagttatcgagagaagtacggcagaataagagggctgggggatcgagtagt
gggaaagatagccattcgattttcaaaaagagaaaaacagaattggcagcggccaagaag
cagcgtgagacgggattctaa

DBGET integrated database retrieval system