Cryptococcus deneoformans B-3501A: CNBA6240 Help Entry CNBA6240          CDS       T01040                                  Name (RefSeq) hypothetical protein   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism cnb  Cryptococcus deneoformans B-3501A Pathway cnb03018   RNA degradation Brite KEGG Orthology (KO) [BR:cnb00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     CNBA6240  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cnb03019]     CNBA6240 Messenger RNA biogenesis [BR:cnb03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      CNBA6240   mRNA degradation factors    5'-3' decay     Decapping complex      CNBA6240 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  4933888 NCBI-ProteinID:  XP_777746 LinkDB All DBs Position 1 Genome browser AA seq 838 aa AA seqDB search MSGGFFGFDTALPEHRQAADRPNDAADTSKFQNASSLLNPFNLEAPEDEEMEVYTWGQGL DKDVEAADELNDATFGVDVNAIRGGQFSFGNEESFSSPAKPSKQSQSQRGPIASTASRYR PKVAADPFAFSEDDFYASRPVKKTQPKPKTKSSAEPVWTKPAGQVTSWGAAPSSTVKPSL GSNHAQVEAPGHIKSLEEIEAEFASMPAPSAAQAAFQAPAQLSGPPPANAVVTLEELERQ MMEEVPQPLAQHQAQQQGPPREVTPTQIPGLAQSGYASQKAVLDSMFPDLGKSPGPVPPG QQQGQTRQSPAPIVPSHEELARQEHFQKVFEAKVQAMSKYNNLMGSSDKDFITRIQLSQL ATSDPYISDFYAQVFSAMERSRRAHESGQMDRPTVVQIAAGFGFGVGGPAGNRFGKMGQN TMQKLSTQVKKLVESRTAHQKSTNTAALQGALGRVTRGGAAAPRPVLAIPTNTKLENRPA SHLNQSTGIQRPPLTRKQIMYALEDLYTDVLELEQFRREAPPSTSVDDIEIWNAKCQVKV DQIWAKLMVQEPIEVSNPHPFISLLNPPKGQRILGRIILQLPDQKIYTLLSLLVVKFHQL DVVARAPPPPVTDASLLTKADRLDRAKREADTDGFLYNLVPAMDMAINKCKLGLLGGLLV AAVQRLDVVKIASTRPGVVLFTALLSKAQSLIRAPPPDPLNPHSGTHPDQIELEHFPRQF SVFLDALLPSLPDLFPSSIAAKHAFGPSAYLMSGENLPEKEGLEMERREAEVWGLAAALA VNSAEEEQTALVAALREKILHTVQGARNPMVGPVRAEMKLRNVNMFLNGLGLDAAMIE NT seq 2517 nt NT seq  +upstreamnt  +downstreamnt atgtcaggcggattcttcggcttcgacaccgcacttcccgaacaccgccaagccgcagac cgtcccaatgacgcagccgacacttccaaattccaaaatgccagttctctgcttaatccc ttcaatctagaagccccagaggacgaggaaatggaagtctacacttggggtcaagggcta gacaaggatgtagaggcagcagatgagctgaatgatgcaacgtttggcgtggacgtcaat gctatcaggggtggacagttctccttcggcaatgaagagtcattttcttccccggctaag ccgtcaaagcaatcccagtcgcaaagaggacccatcgcgtcgactgcctcccgatatcgg cctaaagtcgcggccgatccgtttgccttttctgaagatgacttttatgcttctcgccct gtcaagaagacccaaccgaagcccaagacaaagtcttcggctgagcctgtttggacaaag ccagctggccaggtcactagttggggagcggccccatcctcaacagtaaagccatccctt gggtccaaccatgcacaggtggaagctcccggacatatcaagagcctcgaggagattgaa gcggagtttgcgtcaatgcctgcgcccagtgcggcgcaggctgccttccaggcgcctgct caattatcaggaccgccccctgcaaatgctgttgtgacacttgaagagcttgagaggcaa atgatggaagaagttcctcaacctcttgcccaacatcaagcccagcaacaagggcctcct cgagaggttactcccactcagattccgggtctcgcccagtcggggtatgcttctcaaaaa gctgtcctcgacagtatgtttcctgaccttggcaaaagtcctggacccgtacctccaggg cagcagcaaggccaaacaaggcaaagtcctgcccctatagttcctagtcacgaagagctc gctcggcaggaacatttccaaaaggttttcgaagcgaaagtccaagcaatgtccaaatat aataaccttatgggatcatctgacaaggactttatcacccgcatccaactgtctcagctc gctacgtccgatccttatatttccgacttttacgcccaagtgttttctgcgatggagaga agccgtcgggcccatgagagtggtcaaatggacaggccaactgtggtacaaattgcagca ggttttggcttcggtgttggtggtccggccggcaacagatttggaaagatgggacaaaat actatgcagaaattgtcgacgcaggtaaagaaactggttgaaagtagaacggcgcaccag aaatctaccaatactgctgctcttcagggcgctctcggcagagtcacacgaggtggtgct gctgctcctcgtcccgttcttgccatccctacaaacaccaagctcgaaaaccgtcccgcg tctcatcttaatcaatctacgggcatacaacgtccccctctcactcgcaagcaaatcatg tatgccctagaagatctctacaccgacgtccttgagcttgagcagttccgtagagaagca ccaccttcaacctctgtggatgacattgaaatttggaacgctaaatgtcaagtaaaggta gatcagatctgggcaaagcttatggttcaagaacctatcgaagtatcaaacccccatcca ttcatatccctcctcaaccccccaaaaggtcaacgtatcctcggccggatcatccttcaa cttcctgatcagaagatttacaccttgttgtcccttcttgttgtcaaattccatcaacta gacgttgtagctcgtgctcccccgcctccagtcacagacgccagtctgttaaccaaggct gataggttagaccgcgcgaagcgcgaggcggacacggacggcttcttgtataacttggtc cctgctatggacatggcgattaacaaatgtaagctgggacttttaggtggtctgttggtt gctgctgtgcagaggttggatgttgtgaaaattgcctctaccagacctggagttgtcctg ttcacagcgctcttatcaaaagctcagtctcttatccgcgctccccctcctgatcctctc aaccctcattccggtacccatcctgaccagatagagcttgagcacttccctcgtcagttc tcggtgttccttgatgctcttttaccttctttgccagatcttttcccatcatctatcgct gccaagcatgcctttggtccctctgcgtacttgatgtccggagagaatcttcccgaaaag gagggcttagagatggagaggcgagaagccgaagtctggggcctggctgccgctttggcc gtcaattcagcggaagaggagcagacagcgttggttgctgctttgagggagaaaattctt catactgtccagggtgccagaaaccctatggttggccccgtcagagcggaaatgaaacta agaaatgtgaacatgttcttgaacggtctcggtttggatgcggctatgattgaataa

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