Cryptococcus deneoformans B-3501A: CNBA6530
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Entry
CNBA6530 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K03361
F-box and WD-40 domain protein CDC4
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb04111
Cell cycle - yeast
cnb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CNBA6530
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
CNBA6530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cnb04121
]
CNBA6530
Ubiquitin system [BR:
cnb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
CNBA6530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_EML_2
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
F-box-like
Beta-prop_EML
F-box
ASA1
ANAPC4_WD40
NBCH_WD40
Beta-prop_SPT8
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_2nd
F-box_COS111
TRM82_WD
Motif
Other DBs
NCBI-GeneID:
4933917
NCBI-ProteinID:
XP_777531
LinkDB
All DBs
Position
1:<1822553..>1825668
Genome browser
AA seq
965 aa
AA seq
DB search
MDYNDLDSANGRGLPTGGLTWSNEGPVLQMEDAVVETVVTHTTRTTTSFQPITLPRVPSP
EHLKLPNHLPGEKYPLADQPAPSDMRLFTMTLGGRRVIVQDESASGESGIEMSGPGWTRT
LLNGSMTEAENGVDVADESLTFLQALNRSKGKEKKREYEERSDAPASPVANDISARRSPP
RKKIRGLDEINIPTAPTAQAPNMGSGVELSALFSLPSLVSHFDTLPDRLQQHFLMHLLRR
SRMPTLQRISNFVSTALRRDFITQLPHEVAIQILKSVDGKSLASASRVCKKWKRIIDMER
SVWKARLLDDKLWSGFGTEEQEESLVLERYEALDLHDQLEGRRTSYQAVSGEDEQMFSPT
LGHDLRERPTPLKHVYRRRYQDQKNWIHTRPEHSSFTGQGTNVVTCLQFDEDKIVSASDD
HSINIYNTNDGQLRKRLDGHEGGVWTLQYKGHTLVSGSTDRTVRIWDLEDLRMTYVFAGH
TSTVRCLQIVEPVWEEETQSYQPPVPMIVTGSRDATLRVWKLPQKDDPLYDGIVEEEQTE
LIGPDVNPFHMHLLEGHSLAVRTIATHGRICVSGSYDMSVRVWDIVKGTSLHVLTGHEDK
VYSIVYDPYRKRCASGSLDSTVKVWDIVSGQCLHTLQGHTSLVGLLGLSPNYLVSAAADS
SLRIWDPNTCQLKNVLASHSGAITCFQHDETKVISGSDGTLKLWDVKTGTFVRDLVVGIS
AVWQVSFNKNLLVAASNRNGATVFDVFRFGQSSTQDVDDPSLDNLQPPRWERWAAEKRRR
LEMEEKKKRKSRSRKARTESAWDDRLEKVRDPRMASWKTTLPYAPTGHLGYSVEGEEPDE
RVGLQPPPAFGFRTGSHAGSSKGNSPYQLSSAQSGSNNVVRRGLHDLSGSPTPTGVARRR
AGLMISKVPRAEGSNGASAALPPGSVVGPLDIGESSASTAVVEDNYQDDEGEEDEEMENA
DEHSY
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggactataacgacttggattctgcaaacggccgtgggctccccacgggagggctgaca
tggtccaacgaaggaccggtcttgcagatggaagatgcagtggtagagacagttgttacg
catacaacccgtacaacaacatcgttccaacccatcaccctccctcgagtcccttctcca
gagcatctcaaactcccaaatcaccttcctggcgaaaagtatcctctggcggaccagccc
gcgcccagtgacatgcgtttatttactatgactcttggaggaagaagagtaatcgttcag
gatgaaagtgcctctggagagagtggaatagaaatgtctggccctgggtggacaagaact
ctgttgaacggcagtatgactgaggctgaaaatggtgtcgacgtagcagacgaaagcttg
acttttcttcaagcccttaacaggtcaaaaggcaaagagaagaagagggaatacgaagag
cgaagtgatgctcccgcatccccagtagctaacgatatttctgccaggcgaagtccgcct
agaaagaagattagagggctggatgagatcaatatacctacagcccccacggctcaagca
ccgaatatgggctccggtgttgagctttcagctctattctctctcccgtctcttgtctcc
catttcgacactctacctgatcgtctgcaacaacacttcctcatgcacctccttcgtcgc
tcccgtatgcccactttacaacgcatatcgaacttcgtatccacggctcttcgccgggat
tttatcacccaacttccacacgaggtcgccatacagatactcaaatcagttgatggcaag
agtttagccagtgcctccagggtgtgcaaaaaatggaagagaatcattgatatggaaaga
agtgtatggaaggcgcgattattagacgataaactctggagtggtttcggtacagaagaa
caggaggagagtttagttcttgagcgatacgaggcgctagacctacacgatcagctcgag
gggagacgtactagctatcaagcagtatccggcgaggatgagcaaatgttttcgccaaca
ttgggtcatgatctacgtgaaagacccactcctctcaaacatgtgtaccgtcgtcgatat
caggatcaaaagaattggatacatactcgaccagaacatagttcatttactggccagggt
acaaacgtcgtcacatgtcttcagtttgatgaggataagattgtttctgcgtcggatgat
cattcaatcaacatctacaacacgaatgatggtcagcttcgcaagcggcttgatggacat
gagggcggcgtgtggacgcttcaatataaaggtcacacccttgtcagtggttcgacagac
cggacagtgaggatatgggacctggaagatctccgaatgacctatgtgttcgctggccac
accagcactgttagatgtctgcagattgttgaaccggtgtgggaggaggagacacaatcc
tatcagccacctgtccctatgattgtgactggatccagagatgcaacgctccgtgtttgg
aagctgccccagaaggatgaccctctatatgacggtattgtggaagaggaacaaactgag
ctcattgggcctgacgtaaaccctttccacatgcaccttcttgagggccattcccttgct
gttcgaacaattgccactcatggcagaatctgtgtatcgggctcgtatgatatgagcgtt
agagtatgggacatcgtgaaggggaccagtcttcatgttcttacggggcatgaagataaa
gtgtatagcatcgtctacgacccttatcgcaagagatgtgcctcgggctctttggacagc
accgtcaaggtttgggatatagtctcgggtcaatgtcttcacactctccaaggtcacact
tctcttgtgggcctcctcggtttgtcccctaactatctcgtctctgctgctgccgattcc
tctctccgcatttgggaccctaatacttgccaactcaagaacgtccttgcttctcacagt
ggcgcaatcacatgctttcagcatgatgagacaaaggtcatctcgggctcagatggaacc
ctgaagctctgggacgtcaaaacaggaacattcgttcgagatctggttgtggggatcagc
gcggtgtggcaagtctctttcaacaaaaacctgctggtagctgcctcaaatcggaacggc
gcaactgtttttgatgtcttcagatttggccagtcgagtacacaagatgtagatgatccc
tctcttgacaatctgcagccaccgagatgggaaaggtgggccgccgagaagagaagaagg
ttggaaatggaagagaagaaaaagaggaagagccgcagtcgcaaagctcgtactgagtca
gcctgggatgacagactcgaaaaagtaagagacccaagaatggcatcctggaaaactact
ttaccttatgccccgacgggacatcttggctactctgtcgaaggtgaagaaccagacgaa
cgtgtaggcctccaacctcctccggcatttggcttcaggactgggtctcatgcaggatct
tcgaaaggcaactcgccgtatcagttaagttcggcccagtcagggtcaaacaacgttgtg
cgtcggggtcttcacgatctttcgggtagtcctacgccgactggtgtggcccggagacga
gccgggctaatgatctccaaggtccctagagcagagggatcaaatggggctagcgccgca
ttgccgcctggctcggttgttggtcccctggatattggggagtcgagtgctagtacagct
gtggtggaagacaattatcaggatgatgagggcgaggaggatgaagaaatggagaatgct
gatgagcattcatattga
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