Cryptococcus neoformans var. neoformans B-3501A: CNBA6990
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Entry
CNBA6990 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cnb
Cryptococcus neoformans var. neoformans B-3501A
Pathway
cnb03082
ATP-dependent chromatin remodeling
cnb03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CNBA6990
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CNBA6990
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cnb01009
]
CNBA6990
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnb03021
]
CNBA6990
03036 Chromosome and associated proteins [BR:
cnb03036
]
CNBA6990
Protein phosphatases and associated proteins [BR:
cnb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CNBA6990
Transcription machinery [BR:
cnb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CNBA6990
SWI/SNF complex
CNBA6990
Chromosome and associated proteins [BR:
cnb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CNBA6990
PBAF complex
CNBA6990
SWI/SNF complex
CNBA6990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
4933965
NCBI-ProteinID:
XP_777577
LinkDB
All DBs
Position
1:complement(1952498..1958114)
Genome browser
AA seq
1784 aa
AA seq
DB search
MNYQQQFLNMDSNDGQGDPGPSSMAQQNQSRFRPPFPGQPGMNAQQLAMLQQMSQAAQAQ
AGQPNQGQGRPSLTPQQIQMAMASMQAQAQAQGFNMANMNPQALIQAMRNQQLNQNQQQG
MQAGSQMGQGQGSQAQLGQQNQQQGQQPQAQNLVGSYQPGQPHPNPTQLAFQQQRIAQLM
QAQGMQARSGGPGSPIRPPQQFPQQQQPQQRAGSMPPPPVPGQQPQQQQQQNTPFPPQQP
NQQPTSQSMQLSLSPAQQQMLTQQRQNLLGNPQFQSMPPQQQHALLQQQQTQYLRMIAMQ
QAANQQQGGQHQPQGQSQPSPQQPQQHSTQGRRGSSQGVPQSPVIHRQPTPQQLGGTSQQ
PPLSGLPQHMAPPRPGSAASQRPVTPQTGQVGPGSPAIMRTPPAGGMFQQPLQHMSHSAN
APSPTLSTHSHHSQQHHTPQLQQGPIMASPMHPRMDGAGTPQPGQGQGSGMNGESQGFPT
QQGQHGQQPMAGPSGQDPNNSGTPYRSFRLPGPLDVRALPTLPTNYTPEQQQQVASALTL
MSQAVQGQGQGQGPNQVSEGQQQGQGQFSQPPQIQPSVRPGPGSVQAPGGPGPNANMPRL
PPLPLNIDTSDFPFDPRILQYLPYFGDARWRTQIQAQNPGLFAAVQHAAGLWQTIRPEVM
QRMQAALIAMKNAAFRGTQQGIPVQSGQPGQGQQGQQPLGQQQGLVQQQQQQQQKLQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQHQQQQQQQQQQHQQQQQQQQQQQQQQ
QSGQAPSTQLGPAQLAQQAWTQQQAAQAQAQMQAHAQAQAQAQARMQAQESPVPGSNMSP
LTRPPATPHVPPVPSSPVGGRPSSSSMKDIKRDRTPSGSGSAGQSSMPPPNFIPSHNGKP
VSASGGSLEQVVSATPPSATMGAASLPATAAISTHTAPAHAPTSTPAVAPAPRRQSASGP
SLPIKEWATALHLDIPVTKISPLPVNTVDEAIDPTFDGQLPPLSDKEKANIKEWLDKDVA
FVAREKARQPRVLGKMKRWAEEDDKGTEWWMLRKGEKRVMPQTKLRVLWPSDKERMRAQR
THKGRRQVKFSQADLKKMAEVEDHIVPVRLELEHEGQKLKDTFMWNCSDTVVTPELFAHI
LCDDFAVPHQHFASRIVSAIEERVREYKDQVLPLLERHPKEDCQGKLDPDGDDEARAMCE
VFRKAREGSGIEEEIKTDPGEEDGMDHIRIVTFDDQVNGIDLDDERPWTVEEAMTLVPKE
LPQDLRILIKVDIIIGTQNLTDSFEWDIHSSVTPEEFAASYVTELGLSMEFATAIAHDIR
EQILIYQRSLFLVGHTDSSSVILDDEVRGAFLPPVTTTLRKEDIAMASYTPIFNELGPDQ
LALLESQREKEMKRKKRAGRARRGIVLPEREPVKTQRTLLNNLGPNGVPILFQADNVPVR
DSAPTSRRRGAALAAEANINLLAQDLPIPASASPAPHLPHISARGKRLGRPPKNRAISPV
SIREGPLANGGTPTTGDIKGHRKGYLDDSADEQSINGALSASGRKKPGHYNRIPDSPSEP
STPLSGKVENLPSSFHLDSQTDQTSILKKRKSHNDVDERPPKSAKPDEVGVPFPISKPAS
DNKIEKKKRKSSDSSGIDSDSDSGSDSGSDDSDSTFGGRKDRKKMAAGRTETPAARSSVV
PTGTPGLASAASPGSGRKAIEVPMWIQRALGNMRAKYSRDSFLVIQKPRPADQPDAPPEW
RAKCNDCPGRIYALGPGETLNNFEVHLKNKGHIGNRLAREGKTQ
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgaactatcaacagcaattcctcaacatggactccaatgatggacagggcgacccggga
ccatcttccatggctcaacagaaccagtcgcgctttcgtccaccgtttccgggccagccc
ggcatgaatgctcagcaactagccatgctccagcaaatgtctcaagctgctcaagctcag
gccgggcaaccgaatcaaggccagggtcggccgtcactcacacctcagcaaatacaaatg
gcgatggctagcatgcaggcgcaagctcaggcgcaagggttcaacatggcgaatatgaat
cctcaggcgttgatacaagcgatgagaaatcagcagctgaatcagaaccaacagcaaggg
atgcaagcgggatcgcagatgggacaggggcagggaagccaggcgcagctggggcagcaa
aatcagcagcaagggcaacaacctcaagctcaaaacttagtggggtcgtatcaacccggc
caaccgcatccaaaccctacacaactggcatttcagcaacagcggatagcccagttgatg
caagcgcaagggatgcaggctagatccggtggtccaggatcgccaatacggccgcctcaa
cagtttccccagcagcagcaacctcaacaacgtgcaggttcgatgcctcctccgcctgtt
cctgggcagcagccacaacaacagcaacagcagaacacgccatttcctcctcaacagcct
aatcagcagcccacttctcaatcgatgcaattatccctctcacctgcacagcaacaaatg
ctcacccaacaacgccaaaacctgctgggcaaccctcagtttcagtcaatgccgcctcag
cagcagcacgcgctccttcagcaacaacaaactcagtatctgagaatgattgcgatgcag
caggctgccaaccagcagcaaggtggacaacatcaaccccaaggtcagtctcagccatcc
ccacaacaacctcagcagcactccacccaaggccggcgcggttcatctcaaggtgtaccc
cagagccctgtcatccaccgccaacctacccctcaacagttagggggtacatcgcaacag
ccccctttatctggtctgcctcaacatatggcaccaccgagaccagggtcagcagcgtcc
caaagacctgtcacacctcagactggacaggttggaccagggtcaccagctataatgaga
acacctccagcaggtggaatgttccaacaaccacttcaacatatgtcccacagtgctaat
gcgccctctcccacattatctacacattcacatcatagtcaacaacaccatacaccccaa
ctgcagcagggtccgataatggcgtcacccatgcacccgaggatggacggtgcgggtacg
cctcagcctggtcagggacaagggtcagggatgaacggcgagtcacaaggctttccaacc
cagcagggtcaacatggtcagcaacccatggccggaccatcaggtcaagaccccaataat
agtgggacgccatacagatcgttcaggcttccgggcccgctggacgttcgtgctttgccg
acattgccgacgaattatacgcctgagcaacaacagcaggtggcttcagccctcactctg
atgagtcaggcggttcaagggcaaggacaggggcaagggccgaatcaagtgtctgaaggt
cagcaacaaggacaaggtcaattttctcaaccgcctcagatacaaccatcagttcgcccc
ggtcctggctcggttcaagctccgggaggtccaggtccaaatgctaacatgccccggctt
ccaccccttcccctcaatatcgacacttctgatttcccttttgacccacgtatcctccaa
tatcttccttattttggcgacgctcgctggcgtacacagatccaggcccagaacccggga
ttgtttgcggcggtgcagcatgcagcaggactgtggcagactataaggccggaggtgatg
cagaggatgcaggcggcgctgattgctatgaagaatgctgcgtttagagggacacaacaa
gggattccagtacagtctggtcaaccaggtcagggtcagcagggtcagcaaccgctggga
cagcagcaaggattggtacagcagcagcagcagcagcaacaaaaattgcaacaacaacaa
cagcaacaacagcaacaacagcaacagcaacaacaacagcaacagcaacagcaacagcaa
caacagcaacagcaacagcaacaacaacaacatcaacaacaacatcaacaacaacaacag
caacaacagcagcaacaccaacaacaacagcaacaacaacaacaacaacagcagcagcag
cagtctggacaagcaccaagtactcagttgggaccggcgcagttggcccagcaggcatgg
actcaacaacaagctgctcaagctcaggctcagatgcaagcccatgctcaagcacaggct
caagcacaagcccgaatgcaagcacaagagtctccagtgccaggaagcaacatgtcccct
ctcactcgccctcccgccacaccccatgtaccgcctgtgcccagctcccctgtcggcggc
cgaccgtccagttcaagtatgaaggatattaaacgagatcgcacgccttcaggtagtgga
tcggctggtcagtcttcaatgccgccgcccaactttataccttcacacaatggaaagcca
gtgtcagcatcgggaggatcactggagcaagtcgtcagtgctactcctcccagcgctact
atgggtgctgcctcactcccggcaacagctgctatctctactcatactgctcctgctcac
gctcctacctccacgcccgcagtggcgcccgcacccaggcggcaatccgcgtctggtccc
agtctccccatcaaagaatgggccaccgcccttcacctcgatatcccagttaccaagatc
agccctctccctgtcaacaccgttgatgaagctatcgacccaacctttgacgggcaactg
cctccgctctcagataaggagaaggccaacatcaaagaatggctcgataaggatgtggca
tttgtggcccgagaaaaggccaggcaaccgagggtgctgggaaagatgaaaaggtgggcg
gaagaggatgataagggtacagaatggtggatgttgagaaagggtgagaagagagtgatg
ccgcagacaaagttgagggtcctttggccgagcgataaggagaggatgagagcacaaaga
acgcataagggaaggaggcaggtcaaattctcccaagcggaccttaaaaagatggcagag
gtcgaggatcacattgtgcctgtcaggctggagttagagcacgaagggcaaaagttgaag
gacactttcatgtggaactgctctgatactgttgtgacccctgagctttttgcccatatc
ctttgcgacgactttgccgttccccatcaacattttgcgtcccgtatcgtctccgctatc
gaagagcgtgtccgcgagtacaaagatcaagtccttcctttgcttgagcgtcaccccaaa
gaagattgtcaaggcaagcttgatcccgatggtgacgatgaagctcgtgcgatgtgtgaa
gtcttccgcaaagctcgggaaggaagcggcattgaggaggaaatcaagaccgatccagga
gaggaggatggaatggaccacatcaggattgttacctttgatgatcaagtgaatgggatt
gatttggacgatgagcgaccatggacagtggaagaagccatgaccttggtgccaaaggag
ctgccccaggatttgaggatattgatcaaggtagacatcattattggtacccagaacttg
acggatagctttgagtgggatattcattcttcggttactccagaagagtttgcggcgtct
tatgtcactgagctgggcttgagcatggaatttgcgaccgctatcgcacacgatattcgc
gaacagatcctcatctatcaacgttccctcttccttgtcggccacactgatagctcttct
gttattcttgacgacgaagtgcgcggcgccttcctgcctcctgtcactaccactcttcgt
aaagaagacattgccatggcatcgtacacacccatcttcaatgagcttggtcctgatcag
ttagcattgctcgagtcacagcgagagaaggagatgaagcgcaagaagagagctggccgt
gctagacgcggtatcgtacttcctgaaagggagcccgttaagacccaacgcactttgctc
aataacctcggtcccaatggagttccgattctgttccaagccgataacgtccctgtccga
gactctgctcctaccagtcgaaggcgtggtgctgctctcgccgcagaggcaaacattaat
ctcctggctcaagaccttcctattcccgcatccgcgtctcctgctcctcatttacctcat
atctctgcccggggcaagcgccttggtaggccccctaagaacagagcaataagccctgtt
tctatacgagaagggcctcttgccaatggcggtacacccaccacaggcgatatcaaaggc
cataggaaaggatatctggacgactcagcggatgagcagtccatcaatggagcactgagc
gcatccgggaggaagaagcccggtcattataatagaattcccgattcaccttctgaaccc
tctactcctctctccggcaaggtggaaaatctcccgtcatcatttcatctagactcgcaa
accgatcagacttcgattctcaagaaacgcaaaagtcataatgacgttgatgaacgacca
ccgaagtctgccaagcctgatgaagtcggagtgccattcccgatttccaaacccgcttct
gacaataagatcgaaaagaagaaaaggaagagttccgattcttctggcatcgatagtgat
agtgatagtggcagcgacagcgggagtgatgactcagactcaacttttggcggaaggaaa
gataggaagaaaatggcggcgggcaggactgagacgcctgcagcaaggtcctctgtggtg
ccaactggaactccaggcttggcgtcggctgcatctcctggctcgggaaggaaagctatc
gaagttccgatgtggattcagagagctctcggtaatatgagggcaaaatattctcgagac
tcgttcttggtcatccaaaagccccggccggcggatcaaccagatgcgcctccagagtgg
agagccaaatgtaatgactgcccaggtcgaatctacgctctcggtcccggtgagactctc
aacaattttgaagtccacctcaaaaacaagggccacatcggcaataggttggcaagggaa
gggaagactcagtaa
DBGET
integrated database retrieval system
