Cryptococcus deneoformans B-3501A: CNBA7300
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Entry
CNBA7300 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CNBA7300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnb03400
]
CNBA7300
DNA repair and recombination proteins [BR:
cnb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CNBA7300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Motif
Other DBs
NCBI-GeneID:
4933996
NCBI-ProteinID:
XP_777609
LinkDB
All DBs
Position
1:complement(2040878..2044775)
Genome browser
AA seq
965 aa
AA seq
DB search
MPMYGNESTSAPKPLFDMDKDSEEKFVRFVERMPTKLDGMIRLFDRGDYYSAHGADAIFI
ANEVYRTTNVLKYLGSGSKPSSSSGQYARGLPSVTISMALTKAFLREALTTKQMRVEIYA
PTGGVAPGSRKDHSKWEISKTASPGNLSQVEDLLFSDRDLTANAVSMAIRVVVKDGINTV
GVGFVDVQEKVVGVSEFVDDENFSNTESLLIQLGVKECILQADEKRPELAKLRMLVEWCG
VIVTDRKSSEFQTKNVEQDLNRLLHESHAGAALPEFDLKIAMSALSALINYLSLLSDLSL
HGQLRLYRHDLSQYMKLDASALKALNLMPNPQELGGNKNMSIYGLLNRCKTSQGTRLLGR
WLKQPLVNRHEIIQRQTMVEVFVEDSVNRQSIQTKYLKQMPDFHRISKKFHKRVAGLEDV
VRVYQAVQLLPGLQEILENADTPEPGARDLIEEIWLKPLREHIEKLGNYSSMVEDTIDLD
ELANHNYVILPTIDEDLQRYREELLNVRDQLDDEHRRVGSDLGLDIDKKLHLENHQVYKY
SFRITKAEASLIRNKKEYIDLATQKSGTIFTTKTLKALSEEYFRLQELYEKQQRHLVKEV
VSIASSYTPVLEMLDNLIAAVDVIVSMAHVSSEAPIPYVKPILTEKGTGDVVVLGARHPC
LEVQDDIVFIPNDHEMRKGDSEFIILTGPNMGGKSTYIRQIGVIALMAQVGCFVPATEAR
LPIFDCILARVGAGDNQLKGVSTFMAEMLETATILRSATKDSLIIIDELGRGTSTYDGFG
LAWAISEYIAETIHCFCLFATHFHELTSLSEKNSHVKNLHVEALVKDKDGEGGAKERDIT
LLYQVKEGICDQSFGIHVAELANFPESVVKLAKRKAEELEDFGDDQTRAPSSKFSKTEID
AGTDIVKEFLDTWKSRVSAAGRGGGADAEMAMSEDEMVQLLKDTAEEFKDRLEGNEWVKS
LMSTF
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgtatgggaacgaatccacctcggcgcccaagccgctcttcgatatggacaag
gacagcgaggaaaaatttgtgcgatttgtggagcgtatgccgactaaattggacggcatg
atcaggctgttcgatcgtggggactactactcggctcacggcgcggacgccatcttcatt
gccaacgaagtctacagaaccacaaatgtcctcaaataccttggttcaggttctaaaccc
tcttcctcttctggacaatatgctcgaggattaccttctgtcaccatatccatggctttg
accaaagctttcctccgggaggcccttacaaccaagcagatgcgtgtcgaaatctacgcc
cccacgggaggagtcgctcctggaagccgaaaggatcattccaaatgggagatctcaaag
acagcttcgcccggcaatctgagccaagtagaagacctgctattcagtgacagagatctg
acagcgaatgcggtctcaatggccatcagggtggtggtcaaagatgggataaacactgtc
ggtgtgggtttcgtagatgtacaagaaaaggtggtaggagtgtctgaattcgttgatgat
gagaacttttcgaacaccgagtcgctattgatccaacttggtgtaaaggaatgtatattg
caagcagatgagaagcgtccagagctggccaaattaaggatgttggtggagtggtgtggt
gtcatcgtcaccgatcgcaaatcgagcgagttccaaaccaaaaatgttgaacaagacctt
aatcggttgttgcacgagtctcatgctggtgccgctttaccggagtttgacctcaaaatc
gccatgtcagctctatcagcacttatcaattatctctcacttctatccgacctctccctc
catggtcaactccgattatatcgtcatgatctttctcagtacatgaagcttgacgcgtcc
gccctcaaggctttgaacctgatgccaaatcctcaagagctgggtggtaacaagaatatg
agcatatatgggttgttaaacagatgcaagactagtcaagggacaaggttgttgggaagg
tggttgaaacagccactggtgaatcgccatgagattattcagagacagactatggttgag
gttttcgttgaggattctgtcaatcgccaatctattcaaacaaagtacctcaagcagatg
cctgactttcacagaatctcgaaaaagttccacaaacgagtggctggattggaagacgtt
gtcagggtgtaccaagctgtgcagctgctgcctggtttgcaggaaattctggaaaatgcc
gacaccccagaaccaggagccagggatcttattgaggaaatttggctcaagcctttacgc
gaacatattgaaaagcttggaaattattcttccatggtagaagacaccatcgatcttgac
gaacttgctaatcacaactatgtgatacttcctactatcgatgaagatcttcagagatac
agagaagagttgttaaacgtgcgagatcagcttgatgatgaacacaggcgagttggaagt
gatctgggtctggatatcgacaagaagcttcatttggagaatcatcaagtttacaagtac
tccttcaggattactaaggcggaggctagcctcattcgtaacaagaaggaatatattgac
ctcgctacccaaaaatctggtaccatattcaccactaaaaccctcaaggcgctgagcgag
gagtacttcagactgcaggagttgtacgagaagcagcaaaggcaccttgtcaaggaggtc
gtctcgatcgcttcctcgtacacaccggttttggaaatgctggataacttgattgcggct
gtcgatgtcattgtcagtatggctcacgtctcttctgaggctcccattccttatgttaaa
cccatcttgactgaaaaaggtaccggtgacgtcgttgttctaggcgcccgtcatccttgt
cttgaagtccaagacgatattgtctttatccctaatgaccatgaaatgcgcaagggtgat
tccgagtttatcatccttaccggaccgaacatgggtggtaaatcgacgtacatccgacag
attggtgtcatcgcccttatggctcaggttggatgctttgtgcccgccacagaagctcgg
ctacccatctttgactgtatccttgcgagggttggtgctggggacaaccaactgaaagga
gtcagtacattcatggccgagatgttggagacggcgaccatcttgagatctgctaccaaa
gactctctgatcatcatcgatgagcttggtcgaggtacatctacatacgatggttttggt
cttgcttgggcaatatcagaatacattgccgaaacgattcactgcttctgtctcttcgcc
acccatttccacgagcttaccagcctttctgaaaagaattctcacgtgaagaacttgcac
gttgaagcccttgtcaaggacaaagatggagaagggggtgcgaaggaaagggacattacg
ttgctgtaccaagtcaaagaaggtatctgtgatcaaagtttcggtatccatgtggccgag
ttggcaaacttccctgagagtgtcgtcaagctcgccaagcgtaaagcggaagagttggaa
gattttggagacgaccaaacccgagccccatcatccaagttttcaaagacggaaatcgat
gctggtacagacatcgtcaaagagttcctcgacacttggaaatctcgcgtctctgccgct
ggaaggggaggaggggcggatgctgagatggccatgagtgaagatgagatggttcagctg
ttgaaggataccgcggaagaattcaaggaccgattggaagggaatgagtgggtgaagagc
ttgatgagcacattctag
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