KEGG   Cryptococcus deneoformans B-3501A: CNBB4090
Entry
CNBB4090          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K13117  ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
Organism
cnb  Cryptococcus deneoformans B-3501A
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cnb03041]
    CNBB4090
Enzymes [BR:cnb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     CNBB4090
Spliceosome [BR:cnb03041]
 Complex C
  Other components
   Complex C specific factors
    CNBB4090
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C HA2_N DEAD AAA_22 AAA_19 Cas3-like_C_2 T2SSE SRP54 AAA_30 Zeta_toxin AAA_16 Helicase_RecD AAA_29
Other DBs
NCBI-GeneID: 4934503
NCBI-ProteinID: XP_777178
LinkDB
Position
2:complement(1143351..1146277)
AA seq 699 aa
MPPLQFWKPGTAAPGSSLDRESEKDGSLLPINTSQNAHLSLDAQRQRLPIYKHREKLLWC
VEKYPVVIVVGQTGSGKSTQLPQYLHEAGWTGQNHVVACTQPRRVAATSVATRVAEEVGS
ILGDEVGYTIRFEDLSHPTRTKIKYMTDGMLFRETMMDPLLSKYSVIMIDEAHERGAYTD
LLLGLLKKIMRKRPELRVIISSATIDAEDFLEYFNTNADGTDRSKDDAIIVSLEGRMFPV
EVCYLKEPCADYTQAAVQTVFDLHLREPLGDILVFLTGREEIDQVIQEVADRLLSLPKAA
PKLLALPLYATLPPEEQSLIFDPPPRDTRKVIFSTNIAEASVTIDGIKYVVDSGFVKIKT
YNPRTCMDVLTTTPCSLASANQRAGRAGRTSAGKCFRLYPASILPTTNPSSPMPLTTPPE
LVRSDISLYLLQLKALGIDNLAKFDFMSPPPSEMMIRALEFLFCLKAIDDEGRLTRPMGE
RMAEVPLDPMMAAILLNSHEFRCGEEILTIAAMTSVQNVFITAQGGTKATMAELERRKFT
AEEGDHLTLLNAYNAFARYGQNNKQWCGNHRLNYKALSRAMSIRKQLKKYMERFRIPIVS
CEGDAIRLRKCLVSGYFKNAAKMMPDGTYRSARENAPLHVHPSSVMFTRQPSTGWVIYHE
VVETTKSFMRDLTVINEDWLVELAPHFYKFKGGGLKQHF
NT seq 2100 nt   +upstreamnt  +downstreamnt
atgcctcctctccagttctggaagcccggtacagctgctccaggcagctctcttgataga
gaatccgagaaagacggttcattactccccattaacacatcacaaaatgcccatctcagt
ttggatgcccaacgacaaagattacccatctacaaacatcgagagaagctgctatggtgt
gttgagaagtaccctgtggtgatcgtcgttggccaaactggcagtggaaagtctacacaa
ttgccgcagtatctccatgaggcagggtggacaggacaaaatcatgttgtagcttgtact
caacctcgtcgggtcgctgctaccagcgttgccacgcgagtagccgaagaagtgggcagc
atccttggtgacgaggttggatatacaatcaggttcgaagatttatctcatcccacacgt
accaaaataaagtatatgacggatggaatgctttttcgagaaaccatgatggatccatta
ctgagcaagtacagtgtcattatgattgatgaggcgcatgaaaggggagcatataccgac
ctcttgctaggtttgctcaagaagatcatgagaaaaaggccagagctgcgagtcatcatc
tcctcggccaccatcgatgcagaggattttttagagtacttcaatacaaacgcagacggt
acagatcggtcaaaagacgatgccatcattgtcagcttggaaggtcggatgttcccagta
gaagtctgctaccttaaggaaccatgtgcagattatacccaggcggcagtccagacagtc
tttgacctacatttgagggaaccacttggagatatcctggttttccttactgggcgggaa
gagattgatcaagtaatacaagaagttgcagatagattattatctctacccaaagccgca
cccaaactactcgctctgccgctttatgccactctcccacccgaagaacaatcacttatt
tttgatcctcctccgcgcgatacccgaaaagtcatcttctcaaccaacattgctgaggcg
agtgttaccattgatggtataaaatacgttgtcgactctggctttgtcaaaatcaaaaca
tacaatcctagaacatgtatggacgtcctcaccaccaccccttgttcacttgcctctgca
aatcagcgtgccggccgtgccggtcgtacatctgctggcaaatgcttccgcctttatccc
gcttccattctacccaccaccaacccatcatcacccatgccactgactacccctcctgag
ctcgtgcgctccgatatatcgctttatcttcttcaacttaaagctttgggtatcgataat
ctcgccaaattcgattttatgagccccccgccgagcgagatgatgatcagggcgttggaa
ttccttttctgtttgaaggccatagacgatgaaggaagactgacaagacccatgggtgaa
aggatggcagaggttcctctggatcctatgatggctgctattctgttgaattcccatgag
ttccgatgtggagaagagattctgactattgctgccatgacttcagtgcagaacgtgttt
atcacagctcaaggaggaacgaaggctacaatggctgaactggagaggcggaaattcaca
gcggaggaaggggatcatttgacgttattaaatgcgtacaacgctttcgctcgatatggt
caaaacaacaagcaatggtgtggtaaccatcgtcttaattacaaagctctctcgcgtgcc
atgtcaatccgaaaacagctcaagaagtatatggagaggttcaggattccgatcgtcagt
tgcgaaggtgacgcaatcaggttgagaaaatgcttggtttctggttacttcaagaacgcg
gccaagatgatgccagacgggacatacagatcagctcgtgaaaacgcacctttacatgtc
catccttcatcggtcatgttcactcgtcaaccttccacaggttgggtaatatatcatgaa
gtggtggagacaacgaagagttttatgagggatttgacggtcatcaatgaggactggcta
gtggaattagcgcctcacttctacaagttcaagggaggcggattgaagcagcatttctga

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