Cryptococcus deneoformans B-3501A: CNBB4090
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Entry
CNBB4090 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
cnb
Cryptococcus deneoformans B-3501A
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnb03041
]
CNBB4090
Enzymes [BR:
cnb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CNBB4090
Spliceosome [BR:
cnb03041
]
Complex C
Other components
Complex C specific factors
CNBB4090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
Cas3-like_C_2
T2SSE
SRP54
AAA_30
Zeta_toxin
AAA_16
Helicase_RecD
AAA_29
Motif
Other DBs
NCBI-GeneID:
4934503
NCBI-ProteinID:
XP_777178
LinkDB
All DBs
Position
2:complement(1143351..1146277)
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AA seq
699 aa
AA seq
DB search
MPPLQFWKPGTAAPGSSLDRESEKDGSLLPINTSQNAHLSLDAQRQRLPIYKHREKLLWC
VEKYPVVIVVGQTGSGKSTQLPQYLHEAGWTGQNHVVACTQPRRVAATSVATRVAEEVGS
ILGDEVGYTIRFEDLSHPTRTKIKYMTDGMLFRETMMDPLLSKYSVIMIDEAHERGAYTD
LLLGLLKKIMRKRPELRVIISSATIDAEDFLEYFNTNADGTDRSKDDAIIVSLEGRMFPV
EVCYLKEPCADYTQAAVQTVFDLHLREPLGDILVFLTGREEIDQVIQEVADRLLSLPKAA
PKLLALPLYATLPPEEQSLIFDPPPRDTRKVIFSTNIAEASVTIDGIKYVVDSGFVKIKT
YNPRTCMDVLTTTPCSLASANQRAGRAGRTSAGKCFRLYPASILPTTNPSSPMPLTTPPE
LVRSDISLYLLQLKALGIDNLAKFDFMSPPPSEMMIRALEFLFCLKAIDDEGRLTRPMGE
RMAEVPLDPMMAAILLNSHEFRCGEEILTIAAMTSVQNVFITAQGGTKATMAELERRKFT
AEEGDHLTLLNAYNAFARYGQNNKQWCGNHRLNYKALSRAMSIRKQLKKYMERFRIPIVS
CEGDAIRLRKCLVSGYFKNAAKMMPDGTYRSARENAPLHVHPSSVMFTRQPSTGWVIYHE
VVETTKSFMRDLTVINEDWLVELAPHFYKFKGGGLKQHF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctctccagttctggaagcccggtacagctgctccaggcagctctcttgataga
gaatccgagaaagacggttcattactccccattaacacatcacaaaatgcccatctcagt
ttggatgcccaacgacaaagattacccatctacaaacatcgagagaagctgctatggtgt
gttgagaagtaccctgtggtgatcgtcgttggccaaactggcagtggaaagtctacacaa
ttgccgcagtatctccatgaggcagggtggacaggacaaaatcatgttgtagcttgtact
caacctcgtcgggtcgctgctaccagcgttgccacgcgagtagccgaagaagtgggcagc
atccttggtgacgaggttggatatacaatcaggttcgaagatttatctcatcccacacgt
accaaaataaagtatatgacggatggaatgctttttcgagaaaccatgatggatccatta
ctgagcaagtacagtgtcattatgattgatgaggcgcatgaaaggggagcatataccgac
ctcttgctaggtttgctcaagaagatcatgagaaaaaggccagagctgcgagtcatcatc
tcctcggccaccatcgatgcagaggattttttagagtacttcaatacaaacgcagacggt
acagatcggtcaaaagacgatgccatcattgtcagcttggaaggtcggatgttcccagta
gaagtctgctaccttaaggaaccatgtgcagattatacccaggcggcagtccagacagtc
tttgacctacatttgagggaaccacttggagatatcctggttttccttactgggcgggaa
gagattgatcaagtaatacaagaagttgcagatagattattatctctacccaaagccgca
cccaaactactcgctctgccgctttatgccactctcccacccgaagaacaatcacttatt
tttgatcctcctccgcgcgatacccgaaaagtcatcttctcaaccaacattgctgaggcg
agtgttaccattgatggtataaaatacgttgtcgactctggctttgtcaaaatcaaaaca
tacaatcctagaacatgtatggacgtcctcaccaccaccccttgttcacttgcctctgca
aatcagcgtgccggccgtgccggtcgtacatctgctggcaaatgcttccgcctttatccc
gcttccattctacccaccaccaacccatcatcacccatgccactgactacccctcctgag
ctcgtgcgctccgatatatcgctttatcttcttcaacttaaagctttgggtatcgataat
ctcgccaaattcgattttatgagccccccgccgagcgagatgatgatcagggcgttggaa
ttccttttctgtttgaaggccatagacgatgaaggaagactgacaagacccatgggtgaa
aggatggcagaggttcctctggatcctatgatggctgctattctgttgaattcccatgag
ttccgatgtggagaagagattctgactattgctgccatgacttcagtgcagaacgtgttt
atcacagctcaaggaggaacgaaggctacaatggctgaactggagaggcggaaattcaca
gcggaggaaggggatcatttgacgttattaaatgcgtacaacgctttcgctcgatatggt
caaaacaacaagcaatggtgtggtaaccatcgtcttaattacaaagctctctcgcgtgcc
atgtcaatccgaaaacagctcaagaagtatatggagaggttcaggattccgatcgtcagt
tgcgaaggtgacgcaatcaggttgagaaaatgcttggtttctggttacttcaagaacgcg
gccaagatgatgccagacgggacatacagatcagctcgtgaaaacgcacctttacatgtc
catccttcatcggtcatgttcactcgtcaaccttccacaggttgggtaatatatcatgaa
gtggtggagacaacgaagagttttatgagggatttgacggtcatcaatgaggactggcta
gtggaattagcgcctcacttctacaagttcaagggaggcggattgaagcagcatttctga
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