Cryptococcus deneoformans B-3501A: CNBB4570
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Entry
CNBB4570 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNBB4570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnb03019
]
CNBB4570
03036 Chromosome and associated proteins [BR:
cnb03036
]
CNBB4570
Messenger RNA biogenesis [BR:
cnb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CNBB4570
Chromosome and associated proteins [BR:
cnb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CNBB4570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nucleoporin_FG
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
4934551
NCBI-ProteinID:
XP_777227
LinkDB
All DBs
Position
2:complement(1285371..1291732)
Genome browser
AA seq
1923 aa
AA seq
DB search
MPDNAVVMSAVQSSSGASSSHYSSGVTQTTATFFLLFNPFLPYLLPDISPAEEEAATRKS
WYSQQHLATMFGSTSAWGQNNQNQQQQQGGGLFGGGGGGTFGQQNTGGFGQSGTATGFGQ
PTQNTGGVFGGGATTNTGFGGFGASNQQQQPQQSNAFGAARPAFGASGSTFGQNTTGGGL
FGSSNTANTGFGSNTSNTSGGGLFGAKPATSTFGSGATSNLFGAKPSTGFGASSNTQEVL
KGPAELQTYRTDVPPPPPPSTGTANPIYYPTWQADPSTNTALGKEGPPHLFHSITAMLPY
RGCSWEELRALDYQQGRKEATPQQQNAFGASSAGGFGQPASTGFGQQPATTGFGAKPAGA
GLFGSSSPATGFGSTTSNTSTGFGASNTNTGGGLFGQSQPQQGSSLFGQTNTNTGGGLFG
QTQPQQSTGGGLFGSSNTSTTNPFGGAQTTQQPQATSTFGGFGQSKPAFGSTGTTGFGTG
STGTSTFGQTGTGTTGFGGFGQTQPQQQQQQQQQPTTGGGLFGGATNTQQQAPGTGLFGQ
TAQQQQPAATGFGAAKPGGLFGSTTTPASTNTGFGGFGQTSNTSQPAGTGLFGSTNTNTN
TTGGGLFGQTQPQQTTQQPATGGGLFGSTNAAPATGGGLFGAKPATTTAPSTGLFGQTQP
TQQPAQTGGGLFGNTASTTGGGLFGSTTNNSLGQLGQQNQQSGGGLFGAKPATGGGLFGG
ASATGTGTGLFGQQPQQQQQQQPQTGTTGGLFGNLGQSQPASTGLFGSTTTQPAQQSTFG
GGGLFSGLGQSAMQQPQQQQQQLQPSLTASIDQNPYGNNPLFAYSGQKLEIGSQSKKPAL
PPLTASSYRLTPSTNKSKINKLRGFASPLNVSQSPGRSGSPLSVSSPGRSSMFNSPAAPD
RYKGLSDTALTPNAFVPRPNIKKLSVTPNIGSSIGGNDQLESVLGKSALKASTSSLKGST
STLQTPGTPLVFHPPVNGTPSRPEIAESSVTRSTSAIASPRVAGSERAPKKGDYWCRPKL
EKLEQMSKEDLSQLSGFTAGRRGFGEVSFLEPVDLTLAPLEDILGSIIVVDQSELSVYPD
DYSQKPERGQGLNVPARIMLENVFTTDKATKDWVRDPEDPRFQKFVRRVKAIPDTEFISY
TDDGTWTFRVEHFTTYGIADSDEDESIENGDLGRRREGVARKFSRSPSETSAEDDDDMFL
PTKSIRDVEAEHDSGFEEDQLSEKSYMEDGLTEADESGEMDFPEASWDLPIKSQLGAEGM
KNLRGMQDSFFGSSASMTRPGKELAMSKKREAEKGYESFFREAEGENVKLDERAIKRTSF
GETQISLPKLRQPRKYARVTEEESVAKGAEGLRVDAGLASGRSFRCSWGPNGELVHIGKI
CSPTESVRADTDAVVYIEKVEVLSEETEVETSKSQRLLSLHLETSLIEQVQGVPTATINP
GIRFHDFASRFDPGDRSHEANVFRLGVALFDEIDVQLPEGSSEELIERISSIRRKLALSR
WLEDAVAPLVDSDLITRSEDQPGKIFSLLSGHQVEHAVESALEAGNMRLATLLSQAGGEE
SFKDELLKQLEDWQAYKVNPLIAVGYRKLYALLAGITDISAGDPSRGSDGCPDVLIAEGL
DWKRAFGLHLWYGIPFENTIRDVVDSYTFSLSSSHPPAKPLPPYLEKSSDNIRSWNLPTE
PTDVLYNLLQLYSDDAISLDQVLRSRDTSPSPFDVRLAWHLYVLLSRVLRRRDFEDRDES
SGYSANADRLTAAYAAQLEEIGEWKWAAFVLLHLETVDGRFKALHALLYRHPAITKEDQA
FLTETLCIPEEWIHESRAASLCSTGDAWGEYHALLQAKIYDRAHKILVEKLAPEAVLRDD
KALLRRLCLKLEDKGVSGWEYGGKLFLEWADNSEDTVRLARVSGQPVPPTSHFLSVFNSI
SLA
NT seq
5772 nt
NT seq
+upstream
nt +downstream
nt
atgccggataacgccgttgtgatgtctgcagttcagtccagttcaggcgcgtcttcgagc
cattattcgagcggcgttacgcaaaccacagctactttcttcctactcttcaatcccttc
cttccttacctgctccctgatatctcgcccgcagaggaggaagcggcaactaggaagtct
tggtattcacagcaacacttagctaccatgttcggcagcacttcggcatggggtcaaaat
aaccaaaaccaacaacagcagcaaggcggagggctctttggcggtggaggaggaggaact
ttcggccagcagaatactggggggttcggccaaagtggcaccgctaccggattcggacag
cctacacaaaataccggcggcgtttttggcggcggagctacgaccaacactggatttggt
ggatttggagccagtaaccaacaacagcaaccacaacaatccaatgcgtttggagctgcg
aggccggcgtttggtgcctcaggatcaacctttggtcaaaacaccactggaggtggtctg
tttggaagctcaaacacagccaacactggattcgggtccaatacttccaacacatctggc
gggggtctttttggtgctaaacctgcgacttctacgtttggatcgggtgcaacttcaaac
ctctttggcgctaagccttccactggctttggtgcttcctccaacactcaggaagtcctc
aagggtcctgctgaactccaaacctaccgaaccgatgtcccccctcctccacctccctcg
accggtactgccaatccaatttattaccctacttggcaagcagatccttccaccaatacg
gctctcggtaaggaggggccgccccatcttttccactctatcactgctatgcttccttat
cgaggctgcagttgggaagaattgagagcgttggattaccagcaaggaagaaaggaggcc
acaccccagcagcagaatgcctttggagcctcgtccgccggaggcttcggtcagcctgca
agcactggattcggtcagcaacccgctactactggatttggcgccaaaccagctggcgct
ggtctctttgggtcatcctcccctgctactggctttggttcgacgacgtcaaataccagc
actgggttcggcgcttccaacactaacacgggtggcgggttgttcggccaatcccagcct
caacaaggttcttcattgtttggtcagaccaataccaacactggtggcgggcttttcggc
cagacgcagcctcagcaaagcactggtggcggtctctttggcagcagcaacaccagcact
accaaccctttcggtggtgctcaaaccacacaacagcctcaggccacaagcacctttgga
gggttcggccaaagtaagcctgctttcggaagtacaggtactacaggttttgggacaggc
agtaccggaacgagcacatttggtcaaacagggaccggcacaactggtttcggcggcttc
ggtcaaacgcaaccgcaacaacaacaacagcaacagcaacaacctacgacgggcggcgga
ttattcggtggtgccactaatactcagcagcaagctcccggtacaggacttttcggccag
actgctcaacagcaacagcctgctgcgactgggtttggggccgcgaagcccggtggattg
tttggaagcacgactacccctgcttccacgaatacaggatttggcggttttgggcagacc
agcaataccagtcaacccgccggcaccggtttgtttggaagcactaatacaaacaccaac
accactggaggtggattattcggccaaacccagccccaacaaacgacccaacaaccagca
accggtgggggtctgtttggaagcacgaatgctgcccctgcaactggcggtggtttgttt
ggtgcgaagcctgctacgactacagctcctagtacaggccttttcggccaaacgcaacca
actcaacaacctgcccagacgggaggtggattatttggcaacaccgcttcaacgactggc
ggcggtctctttggcagtaccacaaacaactcccttggtcaattaggccaacaaaaccaa
cagagcggtggcggattatttggcgcgaagccagccacaggcggtggtctgtttggtgga
gcgagcgcgaccggtactggtactggtctctttggtcaacaaccccagcagcagcaacag
caacagccgcaaactggtaccacaggtggactgttcggcaacctcggtcaatcacagccc
gcctcaacgggcttgttcggcagcacgacgactcagccggctcagcaaagcacctttggc
ggtggtggtctttttagcggactgggacagtctgctatgcagcaaccccaacagcaacag
caacaactgcaacctagtctcacggcgtccatcgaccaaaacccatacggaaacaacccc
ctctttgcgtacagtggtcaaaagcttgaaattggctcgcagtccaagaagccggcgctc
ccccctcttactgcatcatcttaccgtctcaccccctcgaccaacaagtctaagatcaac
aaacttcgtggcttcgcgtctcccctcaatgtgtctcagagccctggccgatccggtagc
cctctttctgtcagctcccctggtcgttcgagcatgttcaactctcccgctgctcccgac
aggtataagggtctgagtgacaccgccctgacccccaatgcctttgtgccgcgtccaaac
attaagaaactctcggtgacaccgaatattggcagctccattggcggtaatgaccagctg
gagtctgtccttggcaaatcagctctcaaggcctccacgagctccctcaagggtagtact
tctacccttcagacacctggtactcctcttgtattccatcctcctgtaaatggtacacct
tcccgtcctgagatcgccgaatcttcagtcacccgatcaacctcagccatcgcatcaccc
cgagttgctgggtctgagcgtgcgcccaagaaaggcgattattggtgtagaccaaagttg
gaaaagctcgaacaaatgagcaaagaagatctctcccagctgagtggtttcactgcaggt
cgacgtggtttcggtgaagtttcattccttgaacctgttgatttgacacttgcccccttg
gaagatattcttggctctataatagtcgttgaccaatctgagctctctgtctaccccgac
gactattctcaaaaacctgaaagaggccaaggcctgaatgtgccagctagaatcatgctc
gagaatgtattcaccacggacaaagcgaccaaagactgggtgcgagaccctgaagatcca
agattccagaagtttgttaggcgtgttaaggctattcctgacaccgaattcatcagttat
actgatgatgggacctggaccttccgtgtggagcactttacgacctatggtatcgccgat
agtgacgaggatgaaagtattgaaaatggggacctgggaaggcggagggaaggtgttgcc
aggaaattttccagatctccatcggagacgtcagcagaggacgacgatgatatgtttctt
cctaccaagagtatccgggatgttgaagctgagcatgactctgggtttgaagaggaccag
ctttcagaaaagtcttatatggaagatgggctgacagaggcggatgagagcggtgagatg
gattttcctgaagctagttgggaccttcccatcaaatcgcaactgggagcggagggaatg
aagaatttgcgaggcatgcaagactcctttttcgggtcttctgcgtctatgacaagacct
gggaaagagttagcaatgtcaaagaagagggaagccgagaagggatatgagtcgtttttt
cgtgaagccgaaggggaaaatgtgaagcttgatgagcgggctatcaagcggacctctttc
ggcgagacccaaataagcctgcccaaacttcgtcaaccaaggaagtatgcgagagtaact
gaggaagagagtgtggccaagggagcagaggggctaagagtggacgcaggattggcgtca
gggagatcattcagatgttcttggggtccaaacggagagctggtacacattggaaagatt
tgttcgccgactgagtcagttcgagcggacaccgatgccgttgtctatatcgagaaggtg
gaggtactatcggaagaaaccgaggtggaaacatccaagtctcaaagactactctccctc
cacctggagaccagcttaattgaacaggtgcagggtgtgccaacagctaccatcaaccca
ggcatacggttccacgactttgcttctcgatttgacccaggtgatcgctctcacgaagcc
aacgttttccgtcttggtgttgcccttttcgatgagattgatgttcaacttcctgaaggg
tcatcggaagagcttatcgaacgcatttcgtcaatccgccgaaagctggctttgtccagg
tggttggaagatgctgttgctcctttggttgattccgatctaataactcgaagcgaggac
cagccaggcaagattttctctcttctgagcggccatcaagtcgagcatgctgtcgagtct
gctttggaggccggcaatatgaggttagcaacgttattgtcccaagcgggtggagaagaa
agttttaaagacgaactcttgaagcagttggaagactggcaggcgtacaaggtgaaccct
ctaatcgctgttggttaccggaaactctacgctcttttggccggtatcaccgatatttca
gccggcgatccgtctcgagggtctgatgggtgtcctgacgttttgattgctgaaggtctt
gactggaagcgtgcattcggtcttcatctttggtacggtataccttttgaaaataccatc
cgagatgtcgtcgactcttataccttttctctctcatcttctcatccacctgctaaacct
cttccgccataccttgagaaatcatccgacaacattcgttcctggaatcttcccactgaa
cctacagatgttctgtacaatcttcttcaactttattccgacgacgccatctctcttgac
caggtacttcgatcgcgagacacatctcctagcccatttgacgtgcggttagcatggcat
ctttacgtgttgctttccagagtgttgagaagaagagactttgaagatagggatgagagt
agtggatacagtgcgaacgctgaccgattgacggcggcttatgctgcgcaattggaagag
attggcgaatggaagtgggctgcctttgtattgttgcacctcgagacagtcgatgggcgt
ttcaaggctcttcatgcccttctttaccgacatccggccattactaaagaagatcaagct
tttttgacggaaactctctgcattcctgaagaatggatacacgaatctcgagcagcttcc
ctctgttcgactggtgatgcctggggcgagtatcatgctcttcttcaagccaagatctac
gatcgggcgcacaagatacttgtggagaagttggccccagaggcggtcttgagggatgac
aaggctcttttgagaaggttgtgcttaaagctggaagacaagggtgtttccggttgggag
tatggcggaaagttgttcttggaatgggccgacaattcggaagataccgttcggctcgct
cgcgttagcgggcaaccagtacccccgacgtcccactttctatctgttttcaattccata
tcactcgcttaa
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integrated database retrieval system