KEGG   Cryptococcus deneoformans B-3501A: CNBB4640
Entry
CNBB4640          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
cnb  Cryptococcus deneoformans B-3501A
Pathway
cnb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    CNBB4640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cnb03021]
    CNBB4640
   03019 Messenger RNA biogenesis [BR:cnb03019]
    CNBB4640
Transcription machinery [BR:cnb03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     CNBB4640
Messenger RNA biogenesis [BR:cnb03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     CNBB4640
SSDB
Motif
Pfam: zf-CCCH Torus zf-CCHC zf-CCCH_4 zf_CCCH_4 zf-CCHC_2
Other DBs
NCBI-GeneID: 4934558
NCBI-ProteinID: XP_777234
UniProt: P0CS65
LinkDB
Position
2:<1306908..>1308061
AA seq 332 aa
MAAASNSAPLDPKLGRAADFVRPDFHQVNLDLENYLKTERNFKLDADQQICPLSITPLGC
PLPPSQCPYRHTTPSQLNFKPPPPLPAHPREREKKLTVCKHYLRNLCKMGDNCEYTHDFN
LRTMPVCIWFVKQGKCELGGECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCDA
YAAGFCPDGKDCKLAHPSPNRPPAESYINPIPPDPEAFNGPPPQLPAGYGRWREYKYDPN
AVVVPAAAWVEGGSLSGWRAGGFLSANARRDNQRNRDNDDEGGRGSGGERKGGWQKDLST
VLCFRCNQYGHFANNCPNQYVPGDRGGGRRRE
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcggcagcctcgaattccgcaccgttagatccaaagctcggacgagcagcagatttt
gttcgccctgacttccaccaagtcaatctcgacctggaaaactacctcaagactgagcgc
aacttcaagctcgatgcagaccaacaaatatgtcctctgtccatcacgcctctcggctgt
cctcttccgccttcacaatgtccttatcgtcacactaccccctcccaactcaatttcaag
ccaccacctcctctcccggctcaccctcgagagcgagaaaagaagctaacggtatgcaaa
cactaccttcgaaacctctgtaaaatgggagacaattgcgagtacacccacgactttaac
cttcgcaccatgccagtgtgtatatggtttgtcaaacaaggcaaatgtgagctgggagga
gagtgcctgtatttccaccccagagacagaagagttgagtgtccggattacaacagagga
ttctgcgtgctaggtcctaattgtccgaggaagcatataaggaggaggctgtgtgatgcc
tatgccgctggattttgccctgatggcaaggactgcaaattagctcacccgtctcccaac
cgaccgcctgcagaatcatatatcaaccctatcccacctgaccccgaagccttcaatggc
ccaccaccccaactgcctgctggctatggtcgttggcgggaatacaaatatgaccccaat
gcagtggttgttccagctgcggcgtgggttgagggtggaagtttatctggttggcgagct
ggaggatttctgtctgcgaatgcaagacgagataaccaaaggaatagagacaatgatgat
gagggtggacgcggcagcggaggagagagaaaaggtggctggcaaaaagatcttagcaca
gtgctttgtttcaggtgcaatcagtatggccactttgccaataactgtcctaatcaatat
gtgcctggagaccggggaggcggtagacgacgggaatga

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