Cryptococcus deneoformans B-3501A: CNBB5200
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Entry
CNBB5200 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03013
Nucleocytoplasmic transport
cnb03015
mRNA surveillance pathway
cnb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNBB5200
09122 Translation
03013 Nucleocytoplasmic transport
CNBB5200
03015 mRNA surveillance pathway
CNBB5200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnb03019
]
CNBB5200
03041 Spliceosome [BR:
cnb03041
]
CNBB5200
Messenger RNA biogenesis [BR:
cnb03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
CNBB5200
Spliceosome [BR:
cnb03041
]
Common components
Common spliceosomal components
Cap binding complex
CNBB5200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
Motif
Other DBs
NCBI-GeneID:
4934615
NCBI-ProteinID:
XP_776993
LinkDB
All DBs
Position
2:complement(2134333..2137645)
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AA seq
925 aa
AA seq
DB search
MNGFGQMPMMPMGFPASPGFGVPGGNYGGRGRGRGRDERRGGGRGRGGHGGGRAPVPETS
DNRLRKMVIKLGDDEDFDPIDDPPRLARVLKRGWREGTVGLLEGFRVSVTQQPHKHGYYV
GLLVALSRQLEAEPVKKEKEEPTEGETKSGDAEMKDEKPTIVEEPAYGKEIMDDLNRAFR
GWVEQREWQNVRLCLQFFSLLVTARVVTANSLLTVYDNLLNVLDEVGGGGDRSERAVRAV
GEGLIRSAHTLVETNVGEVEALISKIEGYIIGRRNEPKVLQDPLAPILPAGQEHPTYSDN
LDNLLAALRAFQASNWEPSAVLPAYLREIVPTPGPTAPIPYELQEVAMPPELYEVDSDEL
DVGEGQIGTFSFFADEVVPSPSTLDGWYLRSLVLDIINLYEVNRKECSRLLLELRKFLPR
DTFKPIVPLPEDASPPPSTWSLESLVVSTLLGAMLTLPKSHHKLIYYGSVITELCKASPN
TVAPPVGRSMRKIFSLLGTEGLDVEIVRRVAEWFSVHLSNFGFQWMWKEWVPDLELPSSH
PRRAFMRRVIELEVRLSYYDRILETLPEPMIAEGAGVISPEAPDPFWAYEKDDHPLHAEA
AALLSQIRQKLPSTEIIKYITEMPNASSGPGEPLYPAVRQMVFETISHLGSRSFSHFLNA
TERYSDVLRFLTPDFASRRILLDAVNSYWRRSSEMRLVTLDKYLQYGILEGIDIVEWIFA
DDEAEGEEGDGWTDGDKWEVLSMCLEKHLGRVKAISRRLKVIEREDEAARARKAGEQLER
GEDVNVEDDTNEDSRPETSKEARDAQTSLDIQSTRLEKVLLATFKHFIFALLPWTAEREE
GITTSSEGLKGVLTLLDSDEEGLWGVRAKWGWYREFVRRYQAQLMPFSDLINATVISKMS
KSEDEGSAEARAEKMVKSVWEVIYL
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcttcggacagatgcccatgatgcccatgggatttcctgcaagccctgggttt
ggtgtcccagggggcaactatggtggacgaggcagaggaagaggacgagacgagcgtagg
ggcggtggacgtggacgagggggacacggtggcggaagagctccagtacccgagacctct
gacaaccgattgaggaaaatggtgattaagctgggggatgatgaagacttcgatcctatt
gacgacccccctaggctcgcccgtgtcctcaaacgtggatggcgtgaaggcactgttggt
ctcctggaaggtttccgagtcagcgtaacacagcaacctcacaagcacggttattatgta
ggacttttggttgccctttcccgccagttggaagccgagcctgtcaagaaggagaaagag
gagcctaccgagggtgagaccaaatctggggatgctgaaatgaaggatgaaaagcccacg
atagttgaggagccggcatatggcaaagaaattatggatgatttgaacagagcattccga
ggctgggtggaacagagagaatggcagaatgtccgattatgtcttcaattcttttctctt
cttgttactgcaagggttgtcacagcaaattcgctgttgacagtctacgacaacctgctc
aacgtccttgacgaagtgggcgggggcggtgacaggtcagagagagctgtacgagcggtt
ggcgagggtcttattcgttctgcacacactttggttgagaccaatgtcggtgaagttgag
gcactcatcagcaagattgaagggtacatcattggtcgacgaaatgaaccaaaggtcctc
caagaccctttggcaccgatccttcctgccggccaggagcaccccacttacagcgataac
ctcgataacttgttggcagctctgcgggctttccaggcctcaaactgggaaccatcagcc
gttttacctgcatacttgagggagattgtcccgacacccggtcccacagcacctattcct
tacgaacttcaagaggtcgccatgccccccgagctgtacgaagtcgacagcgatgagctg
gatgttggcgagggacaaattggaactttctcattcttcgccgacgaggtcgttccttca
ccaagcaccctcgacggatggtatcttcgcagccttgttctcgacatcatcaacctttac
gaggtcaatcgcaaagaatgttctcgtctccttttggaactccgcaagtttcttcctcga
gacacgttcaaaccaatcgttcctctcccagaggatgcttcccctcccccttctacttgg
tctcttgaatctctcgtcgtctctactcttttgggcgctatgcttactcttccaaaatct
catcataaacttatctattacggatccgtcattaccgagttgtgtaaagccagtcctaac
actgtagcgcctccagttggtcgctccatgagaaagatctttagtcttctgggcactgag
ggactggatgttgagatagtcaggagggtggctgagtggttctctgttcatttgagtaac
ttcggcttccagtggatgtggaaggaatgggttcctgaccttgagcttccgtcctctcac
cctcgtcgagccttcatgcgtcgagtcattgagcttgaagtcagactatcatactacgac
cgtatcttggaaactcttcccgagcctatgattgcggaaggtgctggcgtgatctccccc
gaggcacctgatcctttctgggcttatgaaaaggatgaccaccctcttcatgccgaagct
gctgcccttctttcgcagatcagacagaaacttcctagtactgaaattatcaagtacatc
actgagatgcccaatgcttcttctggtcccggtgaacctctctaccccgcagttcgtcaa
atggtttttgagaccatctcacatctcggttctcgatctttctctcatttcctcaacgcc
actgaacgatacagtgacgtcctccgattcctcactcccgactttgcctcccgccgtatc
cttctcgatgccgtaaattcctactggcgtcgatcaagcgagatgcgacttgtgacttta
gacaagtacctccagtacggcattcttgagggcatcgacattgtcgaatggatctttgcc
gatgacgaggccgagggcgaggagggtgatggatggaccgatggtgacaagtgggaggtg
ctgtcaatgtgcttggaaaagcaccttgggcgtgtcaaggctatctcaaggcgattgaag
gtcattgagagagaggatgaggcagctagggctagaaaagctggtgaacaattggagcga
ggtgaagacgtcaatgtcgaggacgataccaatgaggactcgcgccccgaaacttctaag
gaagcccgtgatgcccaaacctccctcgacatccagtcgactcgccttgaaaaggtcctt
ttggccactttcaagcacttcatctttgctcttcttccctggactgccgagagagaggaa
ggcatcaccacttccagtgagggccttaagggtgttctcacattgttggatagtgacgag
gagggtctttggggagtcagggcgaagtggggctggtatagagaatttgtcaggaggtat
caagcacagctcatgcccttttccgaccttattaacgccactgtcatctctaagatgtcc
aagtcagaagatgaaggttctgcagaagccagagcggagaagatggtcaagtccgtttgg
gaggtcatttacttgtaa
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