KEGG   Cryptococcus deneoformans B-3501A: CNBB5470
Entry
CNBB5470          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
cnb  Cryptococcus deneoformans B-3501A
Pathway
cnb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CNBB5470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cnb03041]
    CNBB5470
   03032 DNA replication proteins [BR:cnb03032]
    CNBB5470
Spliceosome [BR:cnb03041]
 Complex A
  U1 snRNP components
   Sm proteins
    CNBB5470
  U2 snRNP components
    CNBB5470
 Complex B
  U1 snRNP components
    CNBB5470
  U4/U6.U5 tri-snRNP components
    CNBB5470
 Complex C
  U2 snRNP components
    CNBB5470
DNA replication proteins [BR:cnb03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     CNBB5470
SSDB
Motif
Pfam: LSM SM-ATX Hfq
Other DBs
NCBI-GeneID: 4934643
NCBI-ProteinID: XP_777021
LinkDB
Position
2:2219396..2219816
AA seq 121 aa
MKLNNETVTIELKNGTVIHGTITSVDPQMNTHLKSVKLTLRSQPSSQPPLSLDSIAIRGN
NIRYFILPDSLPLDTLLVDDAPKPKKKKEGAAARGARGAARGARGARGGGRGAPRARGRG
F
NT seq 366 nt   +upstreamnt  +downstreamnt
atgaagctcaataacgagacggtcacgatcgagctcaagaacgggactgtcattcacggt
accatcacttccgtggaccctcaaatgaacacccaccttaagtccgttaagctcactctc
cgttctcaaccttcatcccaaccacctttgtccctcgactctatagccatccgaggaaat
aatatccgatacttcatcctccccgactctcttcctcttgatactttgttggttgacgac
gcgcctaagcctaagaagaagaaggaaggagctgctgctaggggagctagaggagcagct
aggggagcaaggggagccaggggcggtggccgaggcgcgcctagagctagaggaagaggt
ttctag

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