Cryptococcus deneoformans B-3501A: CNBB5630
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Entry
CNBB5630 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03013
Nucleocytoplasmic transport
cnb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNBB5630
03015 mRNA surveillance pathway
CNBB5630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnb03019
]
CNBB5630
03041 Spliceosome [BR:
cnb03041
]
CNBB5630
Messenger RNA biogenesis [BR:
cnb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CNBB5630
Spliceosome [BR:
cnb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
CNBB5630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
4934659
NCBI-ProteinID:
XP_777037
LinkDB
All DBs
Position
2:complement(<2264237..>2265722)
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AA seq
437 aa
AA seq
DB search
MADTGMRGTNALQDSRFKDKELASIKSTKFPKHFSEKVDLRKVNISVLRPWVAEKVTELI
KVEDDIVVEYVFGMLEDRDNPTPDPKKMQVSLVGFMDKYGAAAFMDALWKLLLSAQKTVG
GVPAEFIEAKKQELQRKQQESSSLPLPPAPPAMASHSQARSSGPAGRSRAEDYYGREPRG
DGGVPRGRDGRDGRDGLPTRPYPPARSPRHRSRSRSRSRSRSRSPPPRRPFTNTNSGRYP
DRQPDRDRDRDREWGNRRGYPRGGESFRDRARDEGWGSRGGGSSVNPRERNARRPTPPRR
PSPPRRPSPPRRPSPPRRPSPPPTAQIRIRGRGRGRSLSRSLSRSRTPSRSLSPPIRRDR
GHGRKYGQDSDRGRSLSQSISRSRSRSDTPPRTQTRKRPRSVRSRSRSRSRSHSRSRSRS
RTPVRQRTRDYTPTPEL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacaggtatgcggggcacaaacgccctccaagactctaggttcaaagacaag
gaactggcgagcatcaaatctacaaagttccctaaacatttctctgaaaaagtcgatctc
cgcaaagtcaacatctccgtgctccgtccttgggttgctgaaaaggttaccgagcttatc
aaggtggaggatgatatcgttgtggagtatgtctttgggatgctcgaagatcgtgataat
cctacgcccgacccgaagaagatgcaagtttccctcgtagggttcatggacaagtacggc
gccgcggcattcatggacgctctttggaaactacttctttcagcgcaaaagactgttggc
ggtgttcctgccgaatttatcgaagccaagaaacaggaactgcaacgaaaacaacaggaa
tcatcttccctccctcttcctcctgctccgcctgccatggcatcccattctcaagctcgc
tcatccggcccagcgggccgatcgagggcggaagattactatgggcgtgaaccgcgtgga
gatggtggagtccctcgaggcagagatgggcgagatgggcgagatggactccccacccgg
ccatacccccctgcccgctctcctcgccatcgttcccgatctcgatcccgttcccgttcc
cgatcccgttctcccccaccccgccgaccttttacaaacaccaactctggccgatacccc
gaccgacagcccgaccgcgaccgggaccgcgaccgagagtggggtaaccggcgtggttac
ccaaggggaggagaatcatttagagatcgagctagagacgagggatggggttcccgcggc
ggtggctcgtccgtcaatccgagagaaagaaatgcccgtcgtcctaccccaccacgccgt
ccttccccaccacgccgtccttccccaccgcgccgtccttccccaccgcgccgtccttcc
ccaccacctaccgcccaaattcgaatccgaggtcgaggcaggggtcggtctctctcacgt
tccctttcccgttcgcgtactccctctcggtccctctcaccgcctattcgtcgggaccgt
ggccacggacggaaatacggacaagactctgaccgtggtaggagcctgagccaaagcata
agccgaagcaggagcaggagcgacacccctccgcgtacacagacacgaaaacgcccgcga
tccgtgcgatcacgatcacgctctcgatcacgctctcactctcgctctcgatctcgctcg
cggacacctgtaagacaaaggacgagggattacacgccaacaccggagctgtga
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