Cryptococcus neoformans var. neoformans B-3501A: CNBC0480
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Entry
CNBC0480 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K18725
nucleoporin POM152
Organism
cnb
Cryptococcus neoformans var. neoformans B-3501A
Pathway
cnb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNBC0480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnb03019
]
CNBC0480
Messenger RNA biogenesis [BR:
cnb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CNBC0480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig-like_POM152
Ig_Pom152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
Motif
Other DBs
NCBI-GeneID:
4934712
NCBI-ProteinID:
XP_776554
LinkDB
All DBs
Position
3:complement(142840..147083)
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AA seq
1218 aa
AA seq
DB search
MAAPRPATVIIPAPPPVIPTNLLEPSEQRLFVAAIFGLIEITKLWDTFLPIFITDPDPSW
SSSLRISGAESVLAWTLAEVGMMWAVEPSRMLGYVNIVGTAALGGNWYWNWFYALRRWYE
PPHIEGVHKIRLLPYSTATLNPLSLTYCIPPDAPQPLYIPVIFNNSIPEQVSYKIRSLDT
GHTTVEKVYGSSMKRLPTRPPRLRITDGDDDEDGELELEPEIDPLSALVLQSGGRVVGHP
KDIDPSTLPSVKPHDSMSLVPRNLAPSENILFLTVNKPSVITLSNVMDKKGDKFHITPRR
EAVIIECPTGGKFVEEHRGKVVHKPEKPKSAELRCVGDEEMVYFQARGVSPLRVGWEKKS
KDKSENGFIEGIDDEVAPIDDLALVRRDRVSKTHTVPLRVTHNVPGTHTLSLTTVHDSLH
NTYTPSGYATRQIYNVIPRPSIKFNCQAPYQLLQNQTISLPLEVLVSSQQLEEPIELTYR
YTSPDGKSSDKKFAVKNKREHLSVSEPGIYSLMGIEGPCAGEVMEPSKCEVQMVPLPSMD
MSVETLHECAMDVGATASFDFTGSPPFKLDYTEQRKGGRAKILSQMFQSHYGSIVLRPEQ
EGIYTYTFTALSDGKYKKVAVDKEPIQQTVHPLANVEIVGNSRRRTLYSCSGDVVDIDID
ARGIAPLKLTYLTSYSTHSSNTTLPLSLGRSRLSVPVPSTLSSTSGASGKLNIALLAIED
GNGCIRKLTNPGVEVDIKREKPTGRMAKTGKAVVTQGEIVKVPLRLTGEAPWDVTYSSDG
KEFTLKVRDPNSELSLKDKGVYRLVKVKDSHCPGTVLSGDSSFEIDFKPHPVVSLQASGL
ISHVVTGSGNVYQHRGLCAGQEDQAALKFAGQAPFELGYRHTSGGRTSRHVLKSAQEIGI
LHLSTEPGSHRYDFLSLADGNYPKTDVSITLEHEVFGRPSASFVKHSSRALCLDSTLETD
AKILLKGQGPWILSLSVRKPASTSITTHSVTTANPEWTVSLPQVLEDIGRYEVTIIKVED
VSGCEWVSGETDELRSVVEVVESARIVPVDEKEDLCVGDSLDFLLQGKAPWTIEYAWKGK
DHKVTSSASRFSRFAEKAGKFEVKSVALRGDRCKRQVEGMVRTVHALPSARITSGENDLR
EGDEPAVFRVHFTGTAPFSFTYTRSEQIGSKHKVVETQTITDIMDSNYAISSSLPGDYAV
TSVSDKFCRYPPLSRSKE
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaccacggccagcaacagttataatcccagcaccaccacccgtcatcccgaca
aacctcctcgaaccctccgaacaacgcctcttcgttgccgcaattttcggtctcatagaa
ataaccaaactctgggacaccttccttccaatatttatcactgatcccgatccatcatgg
tcgagttcattgcggataagcggtgcagaatcagtcctagcgtggacattagcagaagtt
ggtatgatgtgggcggtcgaacccagtaggatgttgggttatgtcaacattgttgggacg
gcagcgttaggagggaactggtattggaattggttctatgcgctcagaagatggtatgag
ccacctcatatcgaaggtgtacataagatccgtcttcttccttacagtaccgcaactctt
aatccgttatctctcacatactgtataccgccggacgcccctcagcctttatacattcct
gtcatcttcaacaattcaattcccgaacaggtttcatataaaatacgatctctcgatacg
ggccataccactgttgagaaagtatacgggagttcaatgaagcggttgcccactcgtcct
ccgagattacgcattacagatggagacgatgatgaggatggagagctcgagctagagccc
gagatcgaccctctttcggcacttgtccttcagtccggtggaagagttgttggtcacccc
aaggatattgacccctctactcttccttctgtcaaaccacacgattctatgtctctcgtc
cctcgcaatctcgctccatcagaaaacatcctcttccttactgttaacaaacctagcgtc
atcactctttcaaatgtcatggacaagaagggtgataaatttcacatcactcccaggcgt
gaagccgtcatcattgagtgccccactggtggtaaatttgttgaagagcacaggggcaaa
gtagtccacaaacccgagaaacccaagtctgctgagcttcgatgtgtaggagatgaagag
atggtgtactttcaagctcgtggtgtttcccctctcagggttggatgggaaaagaaaagc
aaagacaagtctgagaatgggtttattgaaggtatcgatgacgaggtcgcacctattgat
gatcttgcgcttgtcagacgggatcgcgtatcgaagactcacactgttcctcttcgagtc
acgcacaacgtcccgggaacacatactttatcccttacaaccgttcatgattccttgcac
aacacctacacgccatccggttacgctactcgacagatctacaatgtcatccctcggcct
tctatcaagtttaactgtcaggcaccataccaactcctccaaaaccaaactatctccctc
cctctcgaggtccttgtcagcagtcaacagcttgaagagccaattgagctcacctacagg
tatacttccccggacggcaaatcctccgataagaagtttgctgtcaagaacaagagagag
cacctatctgtgagcgaacctggaatatacagcttaatgggcattgaaggtccttgtgcg
ggtgaagtgatggagcctagcaagtgtgaggtgcaaatggtgcccttacctagtatggac
atgagcgtcgagactttacacgaatgtgcgatggatgttggtgcgacagcctcatttgac
tttacaggttccccgcctttcaagctggattacaccgaacagcgaaagggcggacgagcc
aagattctaagtcagatgtttcagtcacactacggatccatcgttctccgtcctgagcag
gaaggtatctacacctatacctttacggcattgagcgatgggaagtacaaaaaggtcgcc
gtggataaagagccgattcagcagactgtgcatccgttggccaatgttgagattgttgga
aattccaggagaaggactctctactcttgctctggggatgtggttgacattgacattgat
gctaggggcatcgcacctcttaaactcacatacctcacctcctactcaacccactcatcc
aataccacccttcccctttcccttggccgatcgcgcctgtctgtccccgttccatctaca
ctctcatccacttctggtgcttcgggtaaacttaatatcgccctcttggctatcgaggat
ggtaatggttgtattcgcaagttgacgaaccccggcgttgaggtggatataaagagggag
aagccaacgggtaggatggcaaagacaggaaaggccgtggtgactcagggagagatcgtg
aaagtacctctgaggttgactggggaggcgccatgggatgtgacttactcgagtgatgga
aaggagtttactctcaaagtgagggacccgaatagcgaattgagcttgaaggataaggga
gtttatcgacttgtcaaggtcaaggactctcattgccctggcactgttttgtctggagac
tcttctttcgagatagacttcaagccacaccctgtggtcagtcttcaagcatccggcctg
atttcccacgtcgttactggttccgggaatgtgtaccagcacagaggtctttgtgccggg
caagaagatcaagccgccctcaagttcgcgggtcaagcgcctttcgagctcggataccgt
cacacgtctggtggacgtacttccaggcatgtcctcaagagtgctcaggagattggtatc
cttcatctctctacagaacctggatctcatcggtacgactttttgtctcttgccgatggc
aactatcccaagacggatgtgtccatcactctggagcatgaggtgtttggccgacctagt
gcaagctttgtgaagcatagtagtcgagcgctctgtctcgactctactcttgaaacggat
gcaaagatcttactcaagggtcagggcccctggatccttagcctatctgtgcgtaaaccc
gcttccacctccatcaccacgcacagtgtcaccactgccaatcccgaatggacagtttct
ctcccacaagttctggaggacattgggagatatgaagtgacaattatcaaggtggaagat
gtgagtggctgtgagtgggtatcgggggaaacggatgaattgagaagtgtggtggaggtt
gtggaaagtgcgaggatcgtgccggtggatgagaaggaagatttgtgtgtgggtgatagt
ttggatttcttgttacagggtaaagcgccctggactattgaatatgcgtggaaaggcaag
gatcacaaggtcaccagttcggcgtccaggttctcgagatttgcagagaaggcaggcaaa
tttgaggtcaaatctgttgcacttaggggtgatcgatgcaagcgccaggttgaagggatg
gtacgaaccgttcacgcgttgccttctgcaagaattacctcaggtgaaaatgatttgaga
gaaggcgacgagcccgctgtgttccgtgtgcactttacgggtactgcacctttctccttt
acgtatacccgcagtgaacagattggttcaaagcacaaggttgtcgaaactcaaactata
acggatatcatggacagtaattatgcgatttccagctcattgcctggtgattatgcggtc
acatccgtttccgacaagttctgcagatacccgccgttatcgaggagcaaggagtag
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integrated database retrieval system
