KEGG   Cryptococcus deneoformans B-3501A: CNBC0850
Entry
CNBC0850          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
cnb  Cryptococcus deneoformans B-3501A
Pathway
cnb03013  Nucleocytoplasmic transport
cnb03015  mRNA surveillance pathway
cnb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CNBC0850
  09122 Translation
   03013 Nucleocytoplasmic transport
    CNBC0850
   03015 mRNA surveillance pathway
    CNBC0850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cnb03019]
    CNBC0850
   03041 Spliceosome [BR:cnb03041]
    CNBC0850
   03009 Ribosome biogenesis [BR:cnb03009]
    CNBC0850
   03012 Translation factors [BR:cnb03012]
    CNBC0850
Enzymes [BR:cnb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CNBC0850
Messenger RNA biogenesis [BR:cnb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CNBC0850
   mRNA cycle factors
    Stress granule specific factors
     CNBC0850
Spliceosome [BR:cnb03041]
 Complex C
  Other components
   EJC/TREX
    CNBC0850
Ribosome biogenesis [BR:cnb03009]
 Eukaryotic type
  90S particles
   Helicases
    CNBC0850
Translation factors [BR:cnb03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    CNBC0850
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19
Other DBs
NCBI-GeneID: 4934749
NCBI-ProteinID: XP_776592
UniProt: P0CQ73
LinkDB
Position
3:complement(<258267..>259797)
AA seq 396 aa
MAGVNVGDDKLVFESSEAVTVAPTFEALNLKEDLLRGIYAYNFEKPSAIQQRAIIPIIRG
RDVIAQAQSGTGKTATFSISMLQSIDTNLRETQALVLSPTRELAVQIQTVVLALGDYMNV
SCHACIGGTSVGEDIRKLEAGQQVVSGTPGRVFDMIRRRNLRTKDIKMLILDESDELLNK
GFKDQIYDIYRYLPPATQVVVVSATLPHDVLEMTTKFMTDPVRILVKRDELTLEGIKQFF
VAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTEKMREANFTVSSMHGEMVQKE
RDAIMAEFRGGQSRVLITTDVWARGIDVQQVSLVINYDLPTSRENYLHRIGRSGRFGRKG
VAINFVTVDDVRILRDIEQYYSTQIDEMPMNVAELT
NT seq 1191 nt   +upstreamnt  +downstreamnt
atggctggtgttaatgttggcgacgacaagctcgtattcgagtcttccgaagccgtcacg
gtcgctcctaccttcgaggctctcaacttgaaagaagatctcttgcgcggaatttatgct
tacaactttgagaaaccttccgccatccagcaacgtgcgatcatccccatcatccgtggt
cgagatgttattgcccaagcccagtctggtacgggtaaaaccgccaccttttctatctca
atgcttcagtccatcgacaccaacttgcgcgagactcaggctttggttctgtcccccaca
agggaattggctgtacagatccaaaccgtcgttctcgctctcggtgactacatgaacgtc
tcttgtcatgcttgtattggaggaaccagcgttggtgaagacattaggaagcttgaggct
gggcagcaggttgtcagtggtactcctggacgagtgtttgacatgatccgaaggagaaac
ttgaggactaaggacatcaagatgctcattctcgatgagtctgatgaactcctcaacaaa
ggtttcaaggaccaaatttacgacatctaccgatacctccctcccgccacccaagttgtc
gttgtctccgcgaccctccctcatgacgtcctcgaaatgactaccaagttcatgacagac
cctgtccgaattctcgtcaagcgtgatgaattgactcttgaaggaatcaagcaattcttc
gtcgccgtcgaaaaggaagactggaagtttgacacgctttgtgatttgtacgacactttg
acgattacgcaggcggtcattttctgtaacacccgacgcaaggtcgactggttgacagaa
aagatgcgagaggcgaactttactgtcagcagtatgcacggagaaatggtacaaaaggaa
cgagatgcgatcatggccgaattccgagggggacagagtcgagtattaattaccaccgac
gtctgggcccgaggtatcgacgtccagcaagtttctctagtcatcaactacgaccttcct
acttctcgtgaaaactacttgcacagaataggtcgaagtggtcgattcggcaggaaaggt
gtggcgatcaactttgtcactgttgatgatgtcaggattttgagagatattgagcaatat
tactctactcaaatcgacgaaatgcctatgaacgttgcggagctcacataa

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