Cryptococcus neoformans var. neoformans B-3501A: CNBC1600
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Entry
CNBC1600 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K03265
peptide chain release factor subunit 1
Organism
cnb
Cryptococcus neoformans var. neoformans B-3501A
Pathway
cnb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CNBC1600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnb03019
]
CNBC1600
03012 Translation factors [BR:
cnb03012
]
CNBC1600
Messenger RNA biogenesis [BR:
cnb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CNBC1600
Translation factors [BR:
cnb03012
]
Eukaryotic type
Release factors
CNBC1600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
DUF3440
Motif
Other DBs
NCBI-GeneID:
4934825
NCBI-ProteinID:
XP_776668
LinkDB
All DBs
Position
3:443412..445346
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AA seq
439 aa
AA seq
DB search
MSSAEESDQAIEIWRYRKLLNMLANSRGAGTSCITLILPPRSQISQASNMLTTEYGTASN
IKSRVNRLSVLSAITSTQQKLKLYNRVPDNGLCVFVGTVLNDEGKEKKISFALEPFKPIN
TSLYMCDSRFHVEALEELLENDSKWGFIIIDGNGSLFGTLSGNTREVIHKFTVDLPKKHG
RGGQSALRFSRLREEARRNYVRKVAELAVQHFITADKVNVAGLVLAGSAELKTDLSGSDL
FDPRLLAKVVKVVDVSYGGENGFNQAIELAADSLANVKFVQEKKLIQKYFDEIALDTGKY
CFGINDTLKALEMGAVETLIVWENLDMTRNTLRNAAGEEIIVFSTPADKDREKFMDKSTG
LEMEQAAEPQPLLEWFAEKYREFGATLEFVTNKSQEGSQFVKGFGGIGGLLRYKVDFNDL
GDLEDDDDEFYGSDEDSDI
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgcagaagagtctgatcaggccatcgaaatatggaggtaccgcaagcttctg
aatatgcttgccaactcccgaggtgccggcacctcttgtatcaccctcatccttcctcct
cgatctcaaatttctcaggcgtctaatatgttgactaccgaatacggtaccgcttccaac
atcaagtctcgtgtcaatcgactttccgtcctttccgccattacttccacccaacaaaaa
ctcaagctctacaaccgagtcccggacaacggtctttgtgtctttgtcggtacggttttg
aacgatgaaggcaaagagaagaagatttcctttgcacttgaacctttcaagcctatcaac
acttctttgtacatgtgtgatagcagattccacgttgaggcgcttgaggagcttttagaa
aatgactccaaatggggtttcattatcattgacggtaacggatccctcttcggtactctc
tccggtaacacccgtgaagtcatccacaaattcactgtcgaccttcccaagaaacacggc
cgaggtggtcaatccgctcttcgtttctcacgtctccgagaagaagctcgtcgaaactac
gtccgaaaagttgcggaacttgctgttcagcactttatcaccgccgacaaggtcaacgtt
gccggtctcgtccttgctggtagcgccgagctcaagactgatttgagtggaagtgatctc
tttgacccccgattgctggccaaggttgtcaaggttgtcgatgtgtcttatggtggtgaa
aacggtttcaaccaggctattgagcttgccgccgactcccttgccaatgtcaagtttgta
caggagaagaagcttatccaaaagtacttcgatgagattgccctggacactggcaagtac
tgctttggtatcaacgatacactcaaggcgcttgagatgggtgctgtggagactttgatc
gtctgggaaaacttggatatgacccgaaacactttgcgtaatgccgccggtgaggaaatc
atcgtcttctctacccccgccgacaaggatcgagagaagttcatggacaagtctaccggt
ctcgagatggaacaagccgccgaaccccaacccttgctcgaatggtttgccgaaaagtat
cgcgaattcggtgctaccctcgaattcgtcaccaacaagtcgcaggaaggctcacagttt
gtgaaaggatttggtggtatcggcgggttgttgagatacaaggttgatttcaatgatttg
ggtgatttggaagatgacgatgatgagttttacgggtctgacgaagacagtgacatttga
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