Cryptococcus deneoformans B-3501A: CNBC3320
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Entry
CNBC3320 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CNBC3320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnb03021
]
CNBC3320
Transcription machinery [BR:
cnb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
CNBC3320
Prokaryotic type
Archaeal type
TFE
CNBC3320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
HTH_9
HTH_24
ADK_lid
DUF8118
Motif
Other DBs
NCBI-GeneID:
4934997
NCBI-ProteinID:
XP_776841
LinkDB
All DBs
Position
3:<902284..>903687
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AA seq
416 aa
AA seq
DB search
MSNPQLSSDEIQKLCSDLVYQVAYSFYDVPYIIILKMLVQYNVMTEIDLGQRVGLSPNEV
RKYMGTLHLHRLVKRHVNREKQILPEWKKSQLSTQAMRQSYSSNKPPIGDSRTRDVHYWY
LDYREFANVTKYRLAMMRKGIDERIKSEVGQRGYQCPQDGRVYDTLDVGHLFDPTTSTFR
CEDCQAELIEHDPTIDQENNSSLQDMMQRFNIATAPIRDALKAVEVLTLPSTNVIAWIAQ
NVKTGVVSVNGQEGGEDSKKFEVVIGGEDDEAKEKLAQAQREQNALPEWYTHSTVTGDAT
TLGINDINQRAKVAERAKHVGDHETEVGDQALAAHYELLDEEDDVEEVGVDINEGVQLDT
VERRDEAEVEEVPAGESLGKTVFVNGQMKKIEDVTEDDQELMTSEEYEAYAQAMYG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcctcaactctcctcagacgaaatacagaaactttgctctgatctcgtatat
caagttgcatactccttctacgatgtgccctacatcattatcctcaaaatgctcgttcag
tataacgtaatgacagaaatcgatttgggtcaaagggtagggctctctccaaatgaggtc
aggaaatacatgggtactcttcaccttcatcggctcgtaaaacggcatgtcaaccgcgaa
aagcaaattcttcccgagtggaaaaaatctcagctctccacccaagctatgcgccaaagt
tattcttctaacaagcctccaatcggtgatagccgtacccgcgatgtccattactggtac
cttgactaccgtgaattcgccaatgtcacaaaatatcgacttgcaatgatgcgtaaaggg
attgacgagcggataaagagcgaagtgggccagaggggataccaatgcccccaggatggg
agggtgtatgacacgctcgatgtgggacatctctttgatccaacaacaagcacattcagg
tgtgaagactgccaggcggaattaattgaacacgatcccacaatagaccaggagaacaat
tcgtcactccaagatatgatgcaacgattcaacatcgccaccgcacccataagggatgcg
ctcaaggctgtcgaagtgcttactctccccagcaccaacgtcatcgcatggatcgcacag
aatgtcaagaccggcgtggtcagtgtgaatggacaagagggcggagaagatagcaaaaag
ttcgaagttgtcattgggggggaagacgacgaggccaaagaaaaactcgcacaagcgcag
agagaacagaatgctctgccggaatggtatactcattctactgtcacgggcgatgccaca
acacttgggatcaacgatataaaccaaagagcgaaagtcgccgagagagccaaacatgtc
ggcgaccacgaaacggaggttggggatcaggcccttgctgcccactatgagcttttggac
gaagaggatgacgttgaagaagttggagttgatataaatgaaggggttcagctggatact
gttgagaggagagatgaagcggaagtggaagaggtgcccgcgggagaaagtttaggaaag
acggtctttgttaatggtcaaatgaagaagatagaggacgtcacggaagacgatcaggag
ctgatgacttctgaagaatacgaggcatacgcgcaagctatgtatggctga
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