KEGG   Cryptococcus deneoformans B-3501A: CNBC3960
Entry
CNBC3960          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K09578  peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
Organism
cnb  Cryptococcus deneoformans B-3501A
Pathway
cnb03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    CNBC3960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cnb03021]
    CNBC3960
   03110 Chaperones and folding catalysts [BR:cnb03110]
    CNBC3960
Enzymes [BR:cnb01000]
 5. Isomerases
  5.2  cis-trans-Isomerases
   5.2.1  cis-trans Isomerases (only sub-subclass identified to date)
    5.2.1.8  peptidylprolyl isomerase
     CNBC3960
Transcription machinery [BR:cnb03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     CNBC3960
Chaperones and folding catalysts [BR:cnb03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Parvulin
    CNBC3960
SSDB
Motif
Pfam: Rotamase_3 Rotamase WW Rotamase_2 WW_1 WW_TCERG1
Other DBs
NCBI-GeneID: 4935061
NCBI-ProteinID: XP_776905
LinkDB
Position
3:1088155..1088804
AA seq 178 aa
MSSTGWEIRFSNSRQIPYFYNSERSISTWEPPSELSAEQIQQLPGAAKYMNVQLAQPAGG
KEGQVRASHILAKHAGSRRPASWRNDKITITSDEAQAIIEQHIAYLQSLPPADLPKEFAK
IASTESDCSSARKGGDLGWFGRGQMQKPFEDATFNTPVGQLSGIVKTDSGIHVILRTG
NT seq 537 nt   +upstreamnt  +downstreamnt
atgtcatcaaccggttgggagattcgtttttccaattctcgtcaaatcccctacttctac
aactcggaacgtagcatctccacttgggaacccccttctgaactcagcgcagagcaaatt
cagcaattgcctggcgcggccaagtatatgaatgtacagttggctcaacctgcaggtggc
aaggaaggtcaggtgagggccagtcatatcctggcaaagcatgctggaagcaggaggccc
gcttcatggagaaatgataagatcacaatcacttccgacgaggctcaagctattatcgaa
cagcacatcgcatatcttcaatccctccctccggctgatcttcccaaggaatttgcaaag
attgcctcaacagagagcgattgttcaagcgcgaggaagggtggtgatcttggatggttt
gggaggggacaaatgcaaaagccctttgaggacgcgacgtttaacactcctgtcgggcag
ctgagcgggattgtcaagacggactctggtatccatgtcatcctgcgtactggatag

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