Cryptococcus neoformans var. neoformans B-3501A: CNBC3970
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Entry
CNBC3970 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cnb
Cryptococcus neoformans var. neoformans B-3501A
Pathway
cnb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
CNBC3970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnb04131
]
CNBC3970
Membrane trafficking [BR:
cnb04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
CNBC3970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
4935062
NCBI-ProteinID:
XP_776906
LinkDB
All DBs
Position
3:1089705..1092808
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AA seq
938 aa
AA seq
DB search
MDEAKLLSDALANVKVQTVQLKRCLDQDEIMEALKAASSMLAELRTSSLSPKQYYELYMS
VFDSLRFLSNYLYEAHTEGKHHLADLYELVQYAGNIVPRLYLMITVGSVYMSVPDAPVKE
IMKDMLEMSRGVQHPTRGLFLRHYLSGQTRDFLPVGNSDGPGGNLQDSIGFVLTNFIEMN
KLWVRLQHQGHSREREKREMERRDLRILVGTNLVRLSQLDGVDLDMYRKIILPSVLEQVV
NCRDVIAQEYLMEVVIQVFTDDFHLHTLTPFLGACAQLHPRVNIKGIVIALIDRLAAYAV
REAESEDPEEKRRDEEEAARRLAEKVKGARGKGKNVEEGEKNAPSPAAKPVEADVWGATT
DTTSTTPVTENLSGESSKSPVEGEKLGESPAPTPEQMEKEETAKKFRGIPEDVKLFEVFW
QQVVELIKARPDLSIMDITALCVSLTNLSLSCYPDRLEYVDQVLSFTHGKVHDYSQNPDL
HSSQTVSNLLALLLAPISSYVSILTLLAIPSYLPLLSVQPYSTRLSIGQAVVSSVLKNNT
HIETSDDVTGVLGLCAVLVKDQKDHTIGGGAPQRRGQAIDWREMAEEQGWVARMVHLFRA
DDLGVQFELLQTARRHFTEGGERIRFTFPPLIASSIQLARRFKTRESVEDEWETRVSALF
KFIHQLISILYHKVEAPETCLRLFLLAAQVADDCRLEELTYEFFVQAFVIYEESISESRA
QLQAITGIISSLQTSRVFGTDNYDTLITKAALHGSRLLKKSHQATTVLYASHMWWQGDVP
GREKNDKPPFRDGKRVLECLQKSLRIASSCIDEITSVQLYVDALDRYVYYFEQGVEAVTP
KYVNSLVELITSNIDSVNSGGDVHPSSAGGGLVEGVSGGDMIIKHFRNTLLYVRGRQRQA
QTDVVDQGDEREGGEEKKKVDWESVDVAGGCLKMGLTH
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagccaagcttctttcagatgccttggcaaatgtcaaggttcaaactgtacag
ctcaagagatgcctcgaccaagacgaaataatggaagctctcaaggccgcctcttcgatg
cttgctgaacttcgaacatcatcattatcgccaaaacaatattatgaactgtacatgtct
gtattcgacagtctgaggtttctgagcaactacttatatgaggcccacaccgaggggaaa
caccatctggctgatctttacgagctggtccaatatgcaggtaatattgtaccacggctg
tatttgatgattactgtcgggtctgtttacatgtccgtgccagatgctcccgtcaaagaa
atcatgaaggacatgctcgagatgtcccgaggtgtacagcaccccactcgaggtttgttt
cttcgacactatctctctggtcagaccagagacttcttgcctgtcggcaatagtgatggt
cctggcggcaatcttcaggattctattggttttgttctcacaaactttatcgagatgaac
aagctttgggtgcgacttcaacaccaaggtcattctcgtgaacgcgagaagcgcgagatg
gaacgtcgggatcttcgaatccttgtcggcaccaacctcgtccgtctatcccagttagat
ggcgttgacttggacatgtaccgcaagatcatacttccatcggtcctcgaacaagttgtc
aactgtcgtgatgttatcgcgcaagagtacttgatggaagtcgtcatacaggtatttaca
gacgacttccatctccacacactcacacctttccttggcgcttgcgcccaattgcaccca
cgagttaatatcaagggtattgtcattgctctgatagacagacttgctgcatacgcagtg
agggaggcagagagcgaagatcccgaggagaagaggagagacgaagaagaagctgcaaga
aggttggcagaaaaagtcaaaggcgctagaggaaagggaaagaacgtggaggagggcgag
aagaatgcaccttctccggcggcgaagcctgttgaagcagatgtgtggggagctacaact
gacacaacctctacaactcctgtcactgaaaatttaagcggggaatcatccaagagtccc
gtagaaggagagaaattaggtgaatcacctgccccgactcctgaacagatggagaaggaa
gaaaccgcgaagaaattcagaggaattcctgaagatgtcaagcttttcgaagttttctgg
caacaagtagtcgaacttatcaaggctcgaccagacttgtctatcatggacatcaccgct
ctctgtgtctcgttgacaaacctttctttgagttgctaccctgatcggcttgaatatgtc
gatcaggtcttgtcttttactcacggaaaagtacacgattactctcaaaaccccgatctg
cactcttctcaaactgtctcaaatctccttgcactccttctcgcaccaatcagctcatac
gtatctattctcactttactcgccatcccctcatatcttccacttttgtcagtacagccg
tattccacccgtctatccattggtcaagcggtggtctcctccgtgcttaagaacaatacg
cacattgaaacctctgacgatgtcaccggtgtgcttggtctttgcgctgtacttgtcaaa
gaccagaaagatcatactattggcggcggcgcaccgcagagaagaggccaggcaatcgac
tggagagaaatggcggaagagcagggatgggtcgcaaggatggtgcatctctttagggcc
gatgatcttggtgtccaatttgaattgctgcagacagcgaggagacatttcactgaaggc
ggtgagagaatacggttcactttcccgcccttgattgcctctagtattcaactcgctaga
cgcttcaagacgagggaaagcgtcgaggacgaatgggaaaccagggtatcggccttgttc
aaatttatacaccagctcatttccatcttgtatcacaaggttgaagctccggagacatgc
ttgcgtctcttccttctcgctgctcaagtcgctgacgactgtcgccttgaggaacttacc
tacgaattttttgtccaagcatttgtcatttatgaggagtccatatctgaatctcgagca
cagctacaagctattaccggtattatctcgtctttgcaaacaagtagagtgttcggaaca
gataattacgatactttgataaccaaggccgcattgcatgggagcaggcttctcaagaaa
agccaccaggctacaacagtgctttatgcgagtcacatgtggtggcaaggagatgttcct
ggacgggagaagaatgacaagccgccgttccgggacggcaagcgagttctcgaatgtctt
caaaagtctctccgtatcgcttcatcttgcatcgatgaaatcacctctgtacagctgtac
gttgatgcccttgatcgatatgtctattatttcgagcagggagtggaagctgtcacgccc
aaatacgtcaattctctggtggagcttatcacctcgaatatcgattcggtgaatagtggc
ggagacgtgcatcccagctcagccggtggagggctagtggaaggtgtcagtggcggggat
atgatcatcaagcacttccgaaatacattattatacgttcgaggccgacagcgacaggct
caaacagacgttgttgatcagggagatgaacgagaagggggggaagagaagaagaaggtt
gattgggaaagcgtggacgtagcggggggttgcttgaagatgggccttacgcactaa
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