Cryptococcus deneoformans B-3501A: CNBC4370
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Entry
CNBC4370 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
cnb
Cryptococcus deneoformans B-3501A
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnb03032
]
CNBC4370
03029 Mitochondrial biogenesis [BR:
cnb03029
]
CNBC4370
Enzymes [BR:
cnb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CNBC4370
DNA replication proteins [BR:
cnb03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
CNBC4370
Mitochondrial biogenesis [BR:
cnb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
CNBC4370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Pif1_2B_dom
AAA_22
Herpes_Helicase
AAA_7
T2SSE
Viral_helicase1
AAA_11
UvrD_C_2
AAA_16
nSTAND_NTPase5
NB-ARC
NPHP3_N
SLFN-g3_helicase
ABC_tran
Sigma54_activat
ResIII
bpMoxR
PhoH
AAA_14
RNA_helicase
Mg_chelatase
RsgA_GTPase
NACHT
AAA_5
FtsK_SpoIIIE
TrwB_AAD_bind
ATPase_2
AAA
nSTAND3
UvrD-helicase
TsaE
DUF815
Motif
Other DBs
NCBI-GeneID:
4935102
NCBI-ProteinID:
XP_776511
LinkDB
All DBs
Position
3:complement(<1196177..>1198553)
Genome browser
AA seq
669 aa
AA seq
DB search
MPILTARTLSSSNPNNTSKGTLSRVTSFKRSWGEEDGPESSQLDWSPSPEIVQRKGNILP
SSGPLQSTTTSPSLPESAAKEIASQRRRKAILAALNQNKETAYASPVLDWRSGQTSSTFA
SPQDINCDISVPSVATHCPGSSIRHVNQTLPSLPKRPLPWEGDQKARKKVYTQTSLTPKE
NAQPKSTSSALNIKQRVTLSEEQQKVLSLVVQQQKNVFFTGSAGTGKSVLLREIIHSLRN
KYARNPDAVAVTASTGIAACNIGGVTLHSFGGVGLATDTPEILLRKLKMNKKASGRWTKT
KVLIIDEVSMVDGAMFDKFCKLGQLIRKNSKPWGGIQIIVTGDFFQLPPVTKNGGMPKFA
FEAEMWDETIHLSVNLTKVFRQKDQRFVDMLNEMRFGRLSNESIIAFKSLARPLKFNDGI
EPTALFPRREDVDRANLSRLNQLDSVGFTYHSIDGGSAEANQREKLLSNFMAPKIIELKE
NAQVMLVKNLDETLVNGSMGKVIGFTYKNMFQCDDLGKWTPDADLKDLEEEDKMKSLAVR
QALRDKYQAKGANPLPVVRFKVPGGGTRDVLMEMDVFKAELPNGEVQASRSQLPLILAWA
MSIHKSQGQTLDRVRVDLGKVFEKGQAYVALSRATSLEGLQVTGFTAEKVMAHKKVAVWS
STLKDLNLV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcctattcttacggcccgcacactttcatcgtccaatcccaacaacacatcaaagggg
actctttctcgcgtaacctctttcaaacgcagttggggagaggaggatggaccagagtct
agtcaactggattggagtccaagcccagaaatcgtccaaagaaaaggcaatatactgcca
tcttcaggccctttgcagtccacaacaacttcgcccagtcttccagaatctgccgcaaaa
gaaattgcgtctcaaagacgtcgcaaagctatccttgctgcattaaatcaaaacaaagag
accgcatatgcctctccagttctcgactggcgttcagggcaaacatcatctacttttgcc
tcgcctcaagacatcaattgtgatatttcagttccatccgtcgcaactcattgccctggc
tcttccatacgtcatgtgaaccaaacactcccgtctttgccaaaacggccgctaccttgg
gagggagatcagaaggctcgcaagaaagtttacacccaaaccagtttgacgccaaaggaa
aacgctcagcccaaatcgacaagctctgccctcaacatcaaacagcgtgtgacccttagc
gaagaacagcagaaggtcttgagtctggtagtacagcagcagaaaaacgtgtttttcaca
ggcagtgcaggtaccggtaaatctgttctactacgggaaattatccacagtttacgaaac
aaatacgccagaaacccagatgctgttgcagtaacagcctcgacaggaattgcagcttgc
aacatcggtggagtgaccttacattcatttggtggcgttgggcttgcaacagatacgcca
gaaatacttctcaggaaactcaaaatgaacaaaaaggcatcaggaagatggacgaaaacg
aaggtattaattatcgacgaagtgtctatggtagatggggctatgtttgacaaattttgc
aaactcgggcaactaattcgtaaaaatagcaaaccttggggaggtatacaaatcattgtg
acgggggacttctttcaattacctcctgtgactaagaacggaggtatgcccaaatttgct
ttcgaagcggagatgtgggatgagacaattcatctatctgtgaatctaactaaggtattc
cgtcagaaggaccaaagattcgttgacatgctcaacgagatgcgttttggtcgcctttcc
aatgaatcaatcatcgccttcaaatcacttgcacgtcccctcaaatttaatgatggaatt
gaacccaccgccctcttccctagacgcgaagatgttgaccgcgccaatttatcacgcctc
aatcagcttgattccgtcggcttcacttaccattctatcgatgggggcagtgcagaagca
aatcaacgcgagaaactcctttccaatttcatggcacccaaaataattgaactcaaggag
aacgcacaggtcatgttagtcaaaaatctagacgagacccttgtaaatggttcaatgggc
aaagtgattggattcacttacaaaaatatgttccaatgcgacgatttgggcaaatggaca
cctgacgctgacctgaaagatttggaagaagaggataagatgaaaagtttagcagtcaga
caggcattgagagataagtaccaagccaaaggggcaaatccgttgccggtagtgcgtttt
aaggtgcctggaggcggcacaagggacgttctgatggaaatggatgtctttaaggcggaa
ctgccaaatggggaagtgcaggcgtcgcgatcacagttgccactgatccttgcgtgggcc
atgtccatacacaaatcgcaaggacaaacccttgatcgtgtgagagtcgacctcggcaag
gtctttgaaaagggccaagcgtatgtggccctttcccgagcaacatctctggaaggatta
caggttacaggattcacggcagaaaaggtgatggcccataagaaggttgccgtctggtcc
agcactctcaaggatctgaatctcgtataa
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