Cryptococcus deneoformans B-3501A: CNBC4730
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Entry
CNBC4730 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03430
Mismatch repair
cnb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CNBC4730
03460 Fanconi anemia pathway
CNBC4730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnb03400
]
CNBC4730
DNA repair and recombination proteins [BR:
cnb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
CNBC4730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
4935138
NCBI-ProteinID:
XP_776418
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All DBs
Position
3:complement(1365569..1369258)
Genome browser
AA seq
1018 aa
AA seq
DB search
MIGGIKAIDTSLIHRIHSGQVVLDLQSAIKELLENSLDAGATAIDVRIKDNGLDSIEVVD
NGSGIAEADWESIALRHHTSKLPSLEDLHKVTTFGFRGEALSALAALCDSITVVTATKET
APMGAVIKLGKDGRTIETSGRVARPRGTTVTLSGLFNPLPVRRKEFERNAKKEVSKALVL
LTAYALVPASASVQDARNGVRLKVELTAGGGRASKRSIHLMTDGRGQLRSSVGAVWGPSA
LDNVEDINLRLEVEIDRVMARREGITERTQTVEVKGLISSAQWGCGFSTSSRQFFYINGR
PCNLTKVARAINEVYKSFNTNQLPLAILDFKIPTESVDINVSPDKRTIFVHSEDCLIDSL
KTALESFFAPSRNTFTVEGASRTIKSVRRDHSHPSLKQSQRSQAINQTQQEDASLEEQGG
ERQVASDTEAFDNVIARRPLSRRCSQTTGSIPSSPHEEQMKGSITSAATLTSSLCELNEA
RLSSPSSQASLRQRSLSTSKPSLNPAQTVSAIQALNNCGAVSKDRMSKLRENSQGSTSQK
ATAKHESDDETQISVVEGQEVMEDMPEDANQDEGRNTEIVSPNHETPKISEDEAAVEAIE
IEDQTIETASGVQDHTIKHSTHANRPILEIESSTDENLLLSTRHSASAVWCGVDQQLSEQ
TSASPQHILSGSGRDLSIRNDPPPENRKIDFSTSCDPQRTSASSSSSPIVKPRVSQRLKP
DKAYRDEIISTAPQGEVIMRFDLSRLRKRFANAGNRQAGAQSKRVSQLVKQGDLEEAAGI
KNKDSELAEETLSRVISKADFEKMEVKGQFNKGFIIARLQSTDNGTDDLFIIDQHASDEK
YNFETLQQTTKIKAQALIKPRALHLTAGDEIVAMENIDILNANGFDVHVDESKPAGKGER
ISLLAMPVSKETVFDFKDLEQLLHLLSDDSRPSGQMVRCMKARAMFASRACRKSVMIGKT
LTKGQMSQLLRNMGTIDQPWNCPHGRPTMRHLTKLNPAPESSKIKGRFDWTRWKEALA
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggggaatcaaagctatcgacacctctttaattcatcgcatccattccggacag
gttgtcttagatctacaaagtgccatcaaggagctcttggagaacagcttggatgctggg
gcaacggccattgatgtacgaatcaaagacaacggtctagatagcatagaggttgtcgac
aatggctcgggcatagcggaggctgattgggaatctattgccctgcgacatcacacgtca
aaattgccgtctctagaagatctacacaaagtaactacctttggcttcagaggcgaagca
ctttccgccctggctgccctatgcgactcaattacagtagtgacggctaccaaggagacg
gccccaatgggggcagtaatcaaactcgggaaagatggtcgaacgattgagacttcagga
agggttgcccgaccgcgtgggacaaccgttacactatcaggtctctttaatcctcttcct
gtaaggcgaaaggagtttgaacggaatgcgaagaaagaagtgtcgaaagcgctcgtccta
ctgaccgcatatgccctcgtaccggcaagtgcctcggttcaggacgcacgaaacggagtc
cgtttgaaggttgaacttactgcagggggaggacgagcttccaaacggagcattcacttg
atgacggatggaagaggtcagctgcgttcttctgtaggcgctgtatgggggccttcagcg
ttagataacgttgaggatatcaatctccgtttggaagtggagattgaccgagtcatggct
cgtcgcgaaggaatcacggaaaggacgcagactgtggaggtcaaggggctgatttcatca
gcacagtggggctgtggattttcaacttcctcaaggcaatttttctacatcaatgggcgc
ccatgcaatctcacaaaagtggctagagcgatcaacgaagtctacaaaagcttcaacaca
aaccaactacctctcgctatccttgactttaagattcctactgagagtgtggatatcaat
gttagccctgacaaacgaacaattttcgtgcacagcgaagactgtctcatagattccctc
aagacagctttggagtcattctttgcaccgtcacgtaatacattcactgtggaaggagcc
agtcgcacgataaaaagcgtccgacgcgatcattcacatccatcgctgaaacaaagtcag
cgcagtcaagcaattaatcaaacacaacaagaagacgcaagtttggaggagcaagggggt
gaacgccaagtagcaagtgacacggaggcattcgataatgtaatagctcggagacccctt
tcacgtaggtgctcccaaactaccggcagcatcccttcatctccacacgaggagcaaatg
aaaggatccataacttccgccgcaacattgacttcttccctttgtgaactgaacgaagcc
cggctctcttccccaagctctcaagcgtcacttcggcagcggtccctgagcacatccaaa
ccttccttgaatcctgcccaaacagtctccgccatccaagcgctcaataactgtggggca
gttagcaaagaccgaatgtcgaagctaagggaaaattcacaaggcagcactagtcaaaag
gctactgcgaaacacgaaagtgacgacgaaacgcagatttctgtggttgaaggacaggaa
gtgatggaagatatgcccgaagatgcgaatcaagatgagggaaggaacacggaaatagtc
agcccgaaccatgaaaccccgaagatatctgaagatgaggcagccgtagaggctatcgag
atcgaggatcaaacgatagaaacggcgtccggcgttcaggatcatactataaaacattca
acgcatgcgaacagaccgatcctcgaaatagaaagttccactgatgagaatttactcctt
tccacacgtcattccgcttctgcggtgtggtgcggagtggaccaacaactgtctgagcaa
acatcggcttctcctcaacatatcctttctgggagtggccgtgacttgtctattaggaat
gatcctccacctgaaaatcggaagattgacttttctacctcgtgtgatccgcagcggaca
tctgcctcttcgtcctcttcacctatcgtcaagccgagagtctctcaacgtcttaaacct
gataaagcttaccgggatgagattatctctacggctccacaaggcgaagtcattatgcgt
ttcgacttgtcccgcttgcgcaagagatttgcaaatgcaggaaatcgccaagcaggagcg
cagagcaagcgtgtatcacagcttgtaaaacaaggcgatttagaggaagcagccggtatc
aaaaacaaagactcggaactcgcagaggaaaccctttcaagggtaatctcgaaagctgac
tttgagaagatggaagtcaaggggcagtttaataagggattcatcatagcaaggttacaa
tcgacagataacggaacagatgatctttttatcatcgaccaacatgcttcagacgaaaag
tacaactttgaaaccttacagcaaacaacgaaaatcaaagctcaagctcttatcaaacct
cgggcgcttcatctcacggctggcgatgaaattgttgctatggaaaatattgacatcctc
aatgccaacgggtttgatgtccatgttgatgagagcaagcctgcggggaagggtgagaga
ataagtcttttggcaatgccagtaagcaaagaaaccgtatttgattttaaagatttagaa
cagctacttcacctgttgtctgatgactcccgaccatcaggacagatggtccgttgcatg
aaagccagggcaatgtttgccagtagggcttgcaggaaaagcgtcatgatcggaaagact
ttgacaaagggccaaatgtctcagctactacgcaatatgggtaccatcgatcagccatgg
aattgccctcacggtcgtcccacaatgagacatcttaccaaattgaacccagcaccagaa
tcaagtaaaataaaagggagatttgactggaccaggtggaaagaggctctggcgtga
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