Cryptococcus deneoformans B-3501A: CNBC4900
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Entry
CNBC4900 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
cnb
Cryptococcus deneoformans B-3501A
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cnb03009
]
CNBC4900
Enzymes [BR:
cnb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CNBC4900
Ribosome biogenesis [BR:
cnb03009
]
Eukaryotic type
90S particles
Helicases
CNBC4900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
AAA_19
CDC45
nSTAND3
ResIII
AAA_23
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
4935155
NCBI-ProteinID:
XP_776435
LinkDB
All DBs
Position
3:complement(1409281..1413536)
Genome browser
AA seq
1295 aa
AA seq
DB search
MAGPPVRQRYNAKARGSVAGGSSHKKRKNLSKERTEEDAQDNETDQHAAVFEDPTAGMSS
KKRKRFESYMHSTQAKKLKSEQRLETFKLLQSLAPSSSTSASLLSASTLGQNPMNPTSAK
ERQEKREDRLVRRGIDRLSRRFGEGDDHSGESENDAPSRKGKGKAKEVTVEVIRDGQAEE
AEEVKTTVIPSKGERKAEIKAAEKGKGKGKLPKKAGWNPNLLSTQAPNSSSSEFDSSDSG
NDNSDDEEPKKAAEPSPRLEVGPESVSETIKPPVSAPSAPTVLGGALKKSTDGQVVKPRV
EIRRKKGFVYGMFGRRGIEHREDSDDEDEDDEDEDDADDDGEEEEDDDEMDSDEEASDEE
DGEDSEEEGSEEDEEEEVAPPKKKRSLGFKDWALKQMGQTSQPSAPDLLAAEPTTTLYKS
QPLLAARVGEYIGPLGQELVIPTTSLLDQSKDSDKSKVRPNITRRPSVSETRMGLPILAE
EQSIIESILMHPVVIICGETGSGKTTQVPQMLYEAGFGYKGSDNPGMVAVTQPRRVAAVS
LAERVRSELNLPPNSSLVAHQIRYSSTTSPDTAIKFMTDGVLLRELASDFLLSRYSVVVV
DEAHERGVNTDVLVGVLSRVAKLREKLWREGKQDVKPLRIVVMSATLRVSDFAENPTLFS
KPPPVIHIAARQHPVTVHFSRRTVSDYVTEAYKKVSKIHARLPPGGILVFMTGQGEIQAL
CRKLEKKYGAKKSSQKTQVINDNSLPPEEREAEEVEFGKDEDLAADVDDGAAESDPEALD
TDDEIEGIPGLEFDEPADAPLHVLPLYSLLPNDQQMLVFKPPPEGHRLVIISTNVAETSL
TIPGIRYVVDSGRAKERHYDPINGVQSFQVSWISKASASQRAGRAGRTGPGHCYRLYSSA
LFEDHFEQFSKPEILRMPIEGVVLQMKSMNIDAVINFPFPTPPDRAALRRAENLLTNLGA
LSLPTLTKMINGVQHKGSGGGQITDLGKAMAGFPVSPRFAKMLAIGTQHDCMSYIIAIVA
GMSVGDPFIHEQSLEVDEEEDKVAEISHIKSEDIREKEQRKETRRRFFKAQQQFLALGQG
TSDMFKLLAAIGAYEFDPSPAFCAKTFIRLKAMQEIHQLRAQISSIAKVPLSKLLPPSDT
QLKVLRQILAAGFIDQVAVREDLVLKKGVSYESTRGVAYRAVGLGSEPVFIHPSSALFHC
APPDFVVFSEIVRTSKPWMKGVTKINPIWLPSLGKGLCTFSKPMEMPTKGFARKSGLKDD
EREVFVTPHFKDLGIDLPVMKKKQRREGTRWILVD
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcccaccagttcgtcagaggtacaatgcaaaagcaaggggatcagtcgcaggt
ggatcctcgcacaagaagaggaagaacctcagcaaggagcgcaccgaggaggacgcccag
gacaacgaaaccgaccagcatgctgctgtattcgaagacccaaccgctggcatgtcttca
aagaagcgaaagcgtttcgagtcttatatgcattcaacacaggccaaaaaactcaaatca
gaacagcgtctcgaaaccttcaaacttttacaatccctcgcaccctcttcctccacatct
gcttcactcctatcagcatctaccctgggccaaaaccccatgaatcccactagcgcaaag
gaaaggcaggagaagcgtgaagatcgccttgtgcgtaggggaattgaccgattgtctcga
cggttcggagaaggagacgatcatagtggagaaagtgagaatgatgcaccgagtagaaaa
ggcaagggaaaagcaaaggaggtcacggttgaagttattcgggacggacaagctgaagag
gcagaggaggtcaaaaccacagtgataccctccaaaggtgaacggaaggctgagataaag
gctgctgaaaaaggcaaggggaagggtaagcttcccaagaaggccggatggaatcccaac
cttctttctacacaagctcctaattcatcatcatccgagtttgactcgtctgactctggg
aatgataattccgacgatgaagaaccaaagaaggcagctgaaccttctcccagacttgaa
gttggaccagagtcagtctctgaaaccataaaaccgccggtatcggccccctctgcccct
actgtgctaggcggggctctcaaaaaatcgaccgatgggcaagtcgtgaaaccgagagtt
gaaatacggcggaaaaagggctttgtctatggtatgtttggaagacgaggaatagagcac
agggaagattcagatgatgaggatgaggatgacgaggacgaagatgatgcggatgatgat
ggtgaggaggaggaagatgatgacgagatggatagcgatgaggaggccagcgatgaagaa
gacggagaagactcggaagaggaaggcagtgaagaggacgaagaagaagaagttgctccc
cccaaaaagaagcgatcgcttggtttcaaggattgggcacttaaacagatgggtcaaaca
tcacagccttctgcacctgatctcctcgcagctgagccgactacaacattatacaagtct
caacctttacttgcggcccgggtcggtgaatacattggtcctcttggccaagagcttgtc
attccaacgacttctcttcttgatcaaagtaaagacagtgacaagtccaaggtccgtcca
aacatcactcgtcgaccttcagtatctgagacaaggatggggttgcctattcttgccgag
gagcaatccatcatcgagtcgattttgatgcaccccgtggtcattatctgtggtgagaca
ggtagtggtaaaacgactcaagtgccccaaatgctttatgaagctggatttggatacaag
ggttcagacaatcctggtatggttgctgtcactcaaccgcgtcgtgtcgccgccgtgtca
cttgctgagcgagtccgttccgagctcaatctccccccgaattcatcacttgttgcgcat
caaattcgatactcttccacaacctcgcctgataccgccatcaagtttatgacggacggt
gtccttttgcgagagcttgcatctgactttttgctcagccgatacagcgtggttgttgtc
gatgaggcgcacgagcgaggtgtcaacacggatgtcctcgttggtgtcttgagtagagtc
gctaaacttcgagagaaactgtggcgcgaaggcaagcaagacgtgaagcccttgcgtatc
gttgtcatgtccgctactcttcgagtctccgactttgccgaaaaccccacattattctcc
aaacctccccctgtaattcacattgctgccagacaacatccggtcaccgttcacttcagc
agacgtactgtcagtgattatgtgacggaggcgtacaaaaaagtttccaagatacatgca
aggctgccacctggaggtattttggttttcatgactggacaaggcgagatccaagcattg
tgtaggaaattggagaagaaatatggcgccaaaaagtcatctcagaagactcaagtaatc
aacgataattcgttgcctccagaagagcgcgaagccgaggaagttgaattcggaaaggat
gaagatttggctgcggacgtcgatgatggggccgcagagagcgatcctgaggcccttgat
accgacgacgagattgaaggtatcccaggcctcgaatttgatgaacctgcagacgctccg
ctgcatgttcttcctctttactctttattacccaatgaccaacaaatgctcgttttcaaa
ccgcctcccgagggccacaggctcgtcatcatctctaccaatgtagctgagacgtctctt
actatccccggcatccgctacgtcgttgattctggccgtgccaaagagcgacattatgat
cccatcaatggtgtgcaatcattccaagtctcctggatttcaaaggcttcggcttctcaa
cgagctggccgtgccggtcgtacaggaccaggtcactgctaccgtctctattcatccgct
ctctttgaggatcattttgagcaattctccaaacccgaaatcttacggatgcctattgaa
ggcgtggtcttacaaatgaagagtatgaacatcgatgcggttatcaatttcccattccct
acacccccagaccgggcagccctccgacgagcagagaatctccttacaaacctcggtgcc
ctttcgcttcctactttgacaaagatgatcaatggcgtgcaacacaaaggttcaggcggg
ggtcagattacggacctaggcaaagctatggccgggtttcctgtgtcaccgaggttcgcg
aagatgctggctattggtacccagcacgactgcatgtcttatatcattgctatagtggcg
ggtatgtcagtgggcgaccctttcatacacgaacagtcgctagaggtggatgaagaggaa
gataaagtcgctgagattagccatattaaaagtgaggatatcagggagaaggagcaacgg
aaggagacaagaagacggtttttcaaggcgcaacagcaattcctggcgcttggacagggt
accagcgatatgttcaagctcctcgcggccatcggcgcctacgagttcgacccatcgcct
gccttctgtgcaaagacttttatccgtctcaaggcaatgcaggagatacatcaacttcga
gctcaaatatcctctattgccaaagtaccgctttcgaaattgcttccgcccagtgacact
caactgaaggtgcttcgtcaaatccttgccgccggctttattgaccaggtagctgttcgt
gaagacctcgtattgaagaagggtgtctcgtacgagtctactcgcggggtggcttaccga
gcagttggactgggatccgagcccgtattcattcatccttcatccgccctcttccattgt
gctcctccagactttgtcgtattctctgaaattgtcagaaccagcaaaccgtggatgaag
ggcgtaaccaaaatcaatcctatctggttacctagtcttgggaagggcctttgcaccttc
tccaaaccaatggagatgccgacaaaagggtttgctagaaagagtggtttaaaggacgac
gaaagagaagtgtttgtcacgccgcatttcaaagacttgggaattgatcttccggtgatg
aagaaaaagcagaggagagaaggaaccaggtggattttggtggattga
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