Cryptococcus deneoformans B-3501A: CNBC4960 Help Entry CNBC4960          CDS       T01040                                  Name (RefSeq) hypothetical protein   KO K19525   vacuolar protein sorting-associated protein 13A/C Organism cnb  Cryptococcus deneoformans B-3501A Brite KEGG Orthology (KO) [BR:cnb00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cnb04131]     CNBC4960 Membrane trafficking [BR:cnb04131]  Endosome - Golgi transport   Rab GTPases and associated proteins    Rab associated proteins     CNBC4960 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VPS13_N VPS13_VAB VPS13_M VPS13_C Motif Other DBs NCBI-GeneID:  4935161 NCBI-ProteinID:  XP_776441 LinkDB All DBs Position 3:complement(1431310..1442481) Genome browser AA seq 3181 aa AA seqDB search MQALKNAALGLLNVYVSPYVENLNAQDLSLSLFSGNLQFHGLHLKKSLLERFGLPVEIVA GDIGTLSISIPWTALKTQPVKIVIDDIYVLARARPPGKVDPEEDERVEQATKQEKLKSAE AVDSAASQMGPQGGNEETKQTYVGAIVSKVVDNVQIHIKGIHIRYEDGTSTPDHPFAAGV TLNEFKAVSTDANWMEAFIHDSLHGVHKLVQLEALAIYFDTDTESLEKGPEERSETIQAL KDMLDGPHNHQYILKPVTGEARAIINKHMSNDTPKFDAQVIFDEIGVVIDRDQYRDVLSV IDVFHFYRRTHQYHKFRPSEEQFKANPAQARLKFALEAIRSEVHERNRRWSWDYLQERRD TRKQYVDLFVKKLALPEGKQLPVDEATALSGIEVRSSYEDIRFFRSVARAKAKKDAATRR KMELERQKNQPQTQTWGQWLWGPSARSSDIDGGISEEEKKELDDIIDYDSSAAQETIEAT PRDFMKARVSAKLNKGSFSLRTDPHGKCTDVMALVFDSFSADAVQLTDSMKGKFALGGFR VYDGTTPDSLYPQIVHVKDLVKNAGGQARQAGLNEQGIQAAMDAVEEHLTDDKDPFFLME VEHNPLDGRADNAVTVKMRHLEIIYHRGYVEAVVRFFRPPESQLESIGALLDAAGQTLDG IRKETRAGLEYALEQHKTIDLRVDMNAPIIIIPMDVKVKQSQTLVLDAGHIFVGSKLADK EQLQEVQSKRGRQYNEDDYKQLEDLMYDRLDLRLESTQLLMGDDVEACMRALEDTHSSSS YEFHILERIGMSFTVQNAIVNAPNLTRFKVAGELPELHVNFSDRKYQALMKFIDVSIPKF EGDQTQQEHVTPTTAAQGRRHFGQREIEEYNFEDDRSIISARTTEERDTLDDGSSNGDKG DRFYEAHDQQTESQKSALRQVTFEFSFSVGKLQASLFKSVSPTTERPLADAVLEGFGLTF ALRKWDMSVDLFLRSVTLAMIEQGSARRPLLSSASEGGNSPSDLKLVQVKYLKAQKDSPE FMTKHEGVDTSIDTELSTFKFTISPEPILYLYDFIMTTFVPNNQSSVNQPSQGVETQVLG VDQEEAQPSTDKMRIRVKLTSAQVALENNGNKFALLALPSADVAILLRNGGLRVGARLGN LSLEDLSPEPVADTSFKKLLSIEGGELADFSYETFDPTDKETFPGYNSSVNLRAGSFKFT FMEKPISDLYAFATKFARMKAVYDAAQQAAVQRASEVTRMHFDVVIKTPIIILPRDGITS PDRLILRLGEIIAKNEYFNDPDDTSAIDASLRGINVASEIMVGDKKAILQMIDDVAITAS IRQAGGTAHRSDPHHADTEITTNMSDVKLSLTQRQYVLLMCVLEALPRALNDVSDAETPA ESLEDTPETSTPSTPDSVEIREATGVSLEPELVVSQDQRQLDVKLWTAFDFVFSVDTIAL EIYSVDAITEDDLKSNSIARFALVKSHLGFKKLSDGATEAEFSLKTLSFSNTRTGNSVFR DIIPPASHEGNQIMLQYTMTGGTDPSALAIVTVDSPQLILAVDPLAALLEFAVSPFKKHA DAELQPQENVEQADEFEEGPKQGASLSFRVEVVKATVVVIADDTNPKTQAIQLNIKEVLL SQQSILALKVDRIGMSFGRMDRPNDRVKFLDDLSMALSLDTRRKGSQQMTSFEVEIPDPV IFRASYTNIMLIIDIVNKATTVAAKALAPAEGTGRAEKDSKSLTKDSAYGTSSAAVMDPR RSRRRSSVTRRTSISKRRRSLEGPQVIISKEQLEARVNGFQFVLVGDLQEMPMAHLSTDA FNVSIQDWSGDLKLATSITTSVRYFNLANSYFEPLVDPWNFDLTVNRVSAGPQNSPLNVK LSARERLEVNLTSAFIELAITSMTIWSKEGERAMAGRGSDAPFRVRNLTGLSILIWPEAT DLGKAVTGVKRLDDGADVPWRFEDRKHTRENISAVRHNSLGIQLQDTPWDPLRDISVDRA GDHILTLRPRLDRVSHQIACEIKLVNNIKVITFRSTLNVENKTSLPVEMIVVDSHGKAAS AALKINPGESCPLPLEAAFEKRFRLRPLRGFGFDFSWSAPLHWKTLLAKPIRPISCKHQT PKEPAFYFQAQANFDPKDPAARIYPRMALVLRAPVELENLLPYDLKFRVHDKNSGLSSSS FLVKGGSSPIHTVELSHMFLLNVTPEETSFKQSEYAIINTDDPELPIEDNFQLTDQQGLK TTLKLHYTTYPNSGGAFKVQIYSPFIFMNKTGLPFDLAAKTWAGGQRPIAGRDQFEMFSF PNEDRRSRLHIRVNNSKWSQPVSFEPVSADMQIVVPSASGDNDNYVGLSYAEGIGKYKLT KVITIAPRFLVKNIYSRPIKIRQYGTRHEYSVGVGERIAIHQLQRGAPPQLAMAFDEPNV TWSAPFNIADLGRTNITVRRQSGSNSKTYLMRVETHLEGSSIFLYVSKEKDDAWPLRLRN DTNLSLAFQQIVSVLGFPLTDRERARPVHFLPPRSVQNYAWDWPTAGNKRIKLYVDPGNT SSGEKGVELPNAIDMMAIGIQPPMKVPSTAANKRSTTVSIDVRADGGSQLLTISPYNEET SVYKPTRPGAGIRRSESTTSLSSSTVAFETISVSEKPTMNITVELEGIGISVISRRPDEL LYFSLRGLKLGYSDYPQYYDVFVDCKWIQIDNQLFGGLFPIIFYPTVVPKDGKELESHPT LQSSVTVLKDQSHGVIFVKYATILLQSMTIEMDEDFLFALLDFVKFKNASWKEEGQDVLI EHPKDIPEPDISTTKADVFFEALQLQPVALELSFMRTDRVNVDEKVSTRNPFYYALNALT MTIGNVNAAPLAFRALFLENVRLSIPSLQERVILHYQEQFISQIYRVLGSADFLGNPVGL FNNISSGFSDIFYEPYHGMVMHGNKDIGLGIARGATSFAKKTVFGISDSVTKFTGSIGKG LSAATLDAEFQSKRRMTQRRNKPKHALYGVAAGASAFADSVTSAFEGVASKPMEGAEKGG AAGFAKGVGKGFVGLFTKPAVGVMDFLSASTEGIRNTTTVFDQAELDRVRLPRYIASDGV LRPFSAREALGQSWLKDLDAGAFFHDSYIAHIDLPGDDAISILSNNRILQVQLRKLRVIW QVPFEELQSLSLEANGINLVNRDGRGGPFLPIPDQKAREWYFKQIGKVVVAYNKAHSQRE D NT seq 9546 nt NT seq  +upstreamnt  +downstreamnt atgcaggcgctcaagaatgccgctcttggcttactgaacgtctacgtgtcaccatatgtg gaaaatctgaatgctcaagacctatctctatcgctcttcagtggtaatcttcagttccac ggattgcatctcaagaaatcattgttggaaaggtttggtctgccagtagaaattgtggca ggcgacattggtacactgtcgatctcaattccatggaccgccctcaaaactcagcccgtc aagatagtcatcgatgacatctacgtgttggcgcgagcacgaccgccaggaaaggtggat ccagaagaagacgagagagtggaacaagcaacgaagcaagaaaaactcaaaagcgcagag gcagtagatagtgccgccagccagatggggccgcaaggcggcaatgaggagaccaagcaa acttatgtcggcgcgatcgtgtccaaggtggttgataatgtgcagatccacatcaagggc atccatatccgttatgaagacggcaccagcactccagaccatcctttcgcggcgggagtg acgctcaatgaattcaaagcagtatccaccgatgccaactggatggaggcattcatccac gacagccttcatggcgttcacaaacttgttcagcttgaagccttggcaatctactttgac actgatactgagagtttggaaaagggcccggaagaacgatcagagacaatacaggctctc aaagacatgctggatggcccacacaatcaccaatacatcttgaaacccgtcactggagaa gccagggcgattatcaacaagcacatgtcaaacgatactcccaaatttgatgcccaagtg atcttcgacgagattggcgtagtcattgatcgtgatcagtatagagatgtcttatccgtc attgacgtattccacttctatcgccgaactcatcaatatcacaaattccgtccatcagaa gagcagttcaaggccaatcccgctcaggcgcgtttaaagtttgctctagaagctatacgg tccgaagtgcacgaaagaaacagaaggtggtcttgggattatctgcaagagagaagagat acaaggaaacagtatgtcgatttgttcgtcaagaaacttgcattgcctgaagggaagcaa ctacctgtggatgaggcgaccgccttgagcggtattgaagtgaggtcatcgtacgaagat atccgcttcttcagatccgtcgctagagccaaggccaagaaagatgctgctacgcgcaga aagatggaactggaaaggcagaaaaaccaacctcagactcaaacttggggtcaatggctt tgggggccttctgcgagatcctcagacatcgatggtggtatatccgaggaggagaagaaa gagctggacgatatcatagactacgattcttcggccgctcaagagacgatcgaagctacc cctcgcgactttatgaaggctcgtgtatcggccaagctcaacaaggggtcattttcactc cgcacagatcctcacggaaagtgcacagatgtcatggcacttgtatttgactccttctct gccgacgctgtccagcttacggactctatgaagggcaagtttgctctcggtggttttcgt gtgtatgacggaactactccggactccttatatccccagatcgtgcacgtcaaagacctt gtgaagaatgcaggcggtcaagctcggcaagctggccttaatgagcaaggcatacaggct gctatggatgcggttgaagaacacctcacagacgataaagatccattcttcttgatggaa gtcgaacacaacccattagatggcagagcagataacgcggtgactgttaagatgagacat ttggagattatctaccatcgtggatatgtggaagctgtagtacgattcttcagaccgcct gagagccagcttgagtcaattggagctttgctggacgctgcagggcagactttggacgga atcagaaaagaaactcgagctggtttggaatatgctcttgagcagcacaaaacgatcgac cttcgtgttgacatgaatgcccctatcatcatcatacccatggatgtcaaggtcaaacaa tcccaaacacttgttctcgacgccggtcatatttttgtcgggagcaagctagcagacaag gagcaacttcaagaagttcaaagcaagcggggtagacaatacaatgaggatgactataag cagttggaggacttgatgtacgacaggctagatttgagattagaatcgacccagcttttg atgggcgatgacgtcgaagcttgtatgcgagcattggaggacactcacagctcctcgtcc tacgaatttcatatccttgaacgaatcggcatgtcgtttacggtgcagaacgctattgtt aacgcgcccaacctgacgagattcaaggtcgccggtgaattgcccgagctccacgttaac ttttccgaccgaaagtaccaggctcttatgaagtttatcgatgtatcgatcccgaagttt gaaggtgatcaaactcaacaagagcatgttaccccgacaaccgctgcacagggtcgaagg cactttggccagagagagattgaggagtacaattttgaagatgaccggtctattatctct gcgagaaccactgaggaacgagacactctggatgatggtagctcaaatggtgataagggg gaccgattctacgaggcccacgatcaacaaacggaaagtcaaaaaagtgctcttcgacaa gtcacatttgagttttctttctccgtcggcaagcttcaagcatcgttgttcaagtcggtt tcgccgactacggaaagacctttggcggacgctgtgctcgaaggcttcggtctcactttt gctctacgtaaatgggacatgtctgtggacctattccttcggtctgttacccttgccatg attgagcagggcagtgcccgtcggccactcctgtcctccgcaagtgagggcggcaattca ccttccgatctgaagctggttcaagtcaagtacctgaaggctcaaaaagactcgccagag tttatgaccaagcacgaaggggttgataccagcattgacactgagctttctacattcaaa ttcacgatatctcctgaacctattctgtacctctacgacttcataatgaccacttttgta cccaacaaccaatcatcagtcaaccagccatctcaaggcgtagaaactcaggtactggga gtggatcaagaggaggctcagccttctacagataagatgcgcatacgcgtgaaacttaca agcgcacaagtcgccctcgaaaacaatggcaacaagtttgcgctacttgccttaccatca gcggatgtagccattttgcttcgcaatggtggtcttcgagtaggggctcgcctcggtaat ctttctctggaagatttatccccagaacctgtcgcagacacttcattcaaaaagcttctt tccatcgagggcggcgagttggcagacttcagctatgagactttcgacccaacagataag gaaacgttcccgggttacaattcatcagtcaaccttcgcgccggttctttcaagtttacc tttatggaaaaaccaatcagtgacttgtacgcttttgctaccaaatttgctcgtatgaag gctgtctacgacgccgcccaacaagcggctgtgcaacgcgcgtcagaagtcacacgaatg cactttgacgtggtcatcaaaactccaatcattattcttcctcgggacggcattacctcg cccgatcgactcatcctacgtttgggagagatcattgccaagaatgagtattttaatgac cccgacgatactagtgctatcgacgcaagtttgcgtgggatcaacgtggcgtcagagatt atggttggggacaagaaggcaatcctgcagatgatagatgacgtggccatcactgcgagc atcagacaagcaggcggtacagcccacagatccgatcctcatcatgcggacactgaaatt actaccaacatgtctgacgtaaagctttcccttactcaacggcagtatgtgctcttgatg tgtgttttggaggctcttcctcgtgcacttaacgatgtaagcgacgccgagactcctgca gaatccttagaggacacacctgaaacttctactccttcaactccagattctgtggaaata cgcgaggcgacgggggttagtcttgagccggagctggttgtttcccaagaccagcgacaa ttggatgtgaagctctggacggcgttcgactttgttttctcagttgataccatcgcgtta gaaatctattctgtggacgccatcaccgaggacgatttgaagagcaacagcatagctcga tttgcgctcgtaaaatcccatctcggtttcaagaaattatcggacggtgcgacagaagct gaattttccctcaaaacactctcattctccaatactcgaacgggtaacagcgtatttcgt gatatcattccacctgccagtcacgaaggtaaccaaataatgctgcaatacacaatgaca ggcgggacggatccgtcagctctggccattgtcactgttgatagccctcaattgattctt gctgttgatcccctggctgctcttctcgagtttgctgttagcccgtttaagaaacatgct gacgccgaattgcaacctcaagagaatgtagagcaagcagatgagtttgaagaaggcccc aagcaaggtgcatccctttcattccgagtcgaggtcgtgaaagcgactgttgttgtcatt gccgacgataccaatccgaagactcaagccattcaactcaacattaaggaagttttgctt tcacagcagagtatactcgctctcaaggttgacagaattggcatgtcttttggccgaatg gatcgtcccaatgacagagtgaagttcctcgacgatctcagcatggctttgtctcttgac acaaggcggaagggatctcaacagatgacaagcttcgaagtagaaattcccgacccggtc atcttccgagcgtcgtacactaacattatgctcatcattgatatcgtgaacaaggctact acagttgctgctaaagcattagcaccagccgagggaacaggaagagcagagaaagattca aaatctttgacgaaagatagtgcttatggaacttcttcagctgccgtcatggaccctagg cgctccagacgccgtagttctgtcactcgtcggacgtccatcagcaagcggagacgttcc ttggaaggaccgcaagtgattatctcaaaagaacaactcgaagcacgtgtcaatggcttc cagttcgttcttgtcggtgaccttcaagaaatgcctatggctcacttatctaccgatgct tttaacgtgtcaatccaagactggtctggagatctgaaattggctacatctattactacc tctgttcggtatttcaacctggccaactcttatttcgaaccgttagtagatccttggaac tttgatcttacagtcaaccgtgtgtctgctggcccccagaatagcccacttaacgtcaag ctcagcgctcgggaacgtctggaagtcaacctcacttctgctttcattgagttagctatc acttcaatgacaatttggagcaaagaaggggagcgggctatggctgggcggggatccgac gctcctttcagagttcgaaacttgactggtttgagtatactgatatggccagaggcaaca gatctcgggaaggctgttactggtgtcaagcggctggatgatggggctgatgtgccatgg agatttgaggaccgtaagcatacccgagaaaacatatcggctgttcgacacaactctcta ggcatacagctgcaggacacaccatgggatcctttgcgtgatatatcagtagatagagcg ggtgaccacatcctcactcttcgcccccggcttgacagggtttcacatcagattgcctgt gagatcaaattggtgaataacatcaaagtcatcacatttaggtctaccttaaatgtggaa aataaaacaagtctgcctgtagaaatgattgtggtcgactctcatgggaaagcagcatct gcagcattgaaaataaatccaggcgaatcatgtcctcttcctctggaagctgcttttgag aaacgattccggttgagaccgttgcggggattcggttttgattttagttggtcggctcct ctccattggaagactttgttagcaaaaccgattcggcctatcagttgcaagcatcaaact ccaaaagaacccgctttctatttccaggcccaagccaacttcgatcctaaagaccccgct gcgagaatttatcctcgtatggctctagtcctacgagcacccgtggaacttgaaaatcta ttaccttatgacctgaagttccgcgtgcatgacaagaacagtgggcttagctccagcagt ttcctagtcaagggtggctcaagccctattcacactgtggaattgtctcatatgttccta ctcaacgtcacaccggaagagacaagcttcaaacagagtgaatatgctatcattaacaca gacgaccctgagctgccgatcgaagataacttccaattgacagatcagcaagggttaaaa accacattgaagcttcattatactacgtatcccaactctggaggagccttcaaagtgcag atttacagtccttttatattcatgaacaagaccggtcttccctttgatcttgctgctaag acttgggcaggtggtcagaggcctatcgctggacgagatcaatttgaaatgttttcattc ccaaacgaagatcgacgcagccgacttcatatccgagtcaataactcgaagtggtctcaa cctgtatctttcgagcctgtatctgccgacatgcagattgtagtgcccagtgcatctgga gataatgataattacgtcggtctatcatatgcggagggtataggaaagtataaactgacc aaggtaatcaccatcgctccgagattcctggtcaaaaacatctactcccgtcccataaag atccgacaatatggaacccgccatgagtattctgttggtgtcggtgaacgaattgcaatc catcaattgcagcgtggggctcctcctcagttagccatggcatttgatgagccgaacgta acttggtccgcgccattcaatattgctgatcttgggcgcactaatatcactgtcaggcga caatcagggagtaattccaagacatatctaatgcgtgttgaaacgcacttagaaggttct agtattttcctgtatgtctcgaaagagaaggatgatgcttggcctctccgcttgcggaat gacacaaatctgtcgctggctttccaacagatcgttagtgttttgggctttcctttgact gaccgagaaagggcacgtcctgtacatttcctgcctccccgctccgtgcagaactatgct tgggactggcctaccgctggcaataaacgaatcaagctatacgttgaccctgggaacact tcgagtggtgagaagggagtggagcttcccaacgcaatcgacatgatggccataggaatc cagccacctatgaaagtaccttccaccgccgccaacaaacgttctactaccgtctcgatt gatgtacgagcagatggcgggtcacagctcctcaccatctctccgtacaacgaggaaacc agtgtatacaaaccaacacggccaggggcaggcattaggcgtagcgagagtactacttcg ctttcatcgtcgactgtggcgtttgagaccatctcagtcagcgaaaagccgacgatgaat attacagtcgagctcgagggtataggtatatcagtgataagcagacggccagacgaacta ctctacttttctctgagagggctcaaactggggtactcggactatcctcagtactacgac gtttttgtggactgcaagtggatacaaattgataatcaacttttcggaggcctgttcccc atcattttctaccccactgtagtgcccaaagacggcaaggaacttgaatcgcaccctaca ctccagtcatcggtcaccgtcctaaaagatcaatcccatggtgtcatctttgttaaatac gcaactatactgctgcagtcgatgactatagaaatggacgaagacttcttgttcgcgctt cttgacttcgtcaagttcaaaaacgcttcgtggaaggaagaaggacaagatgtcctcatc gaacatcccaaagatatcccggagcctgacatatcaaccactaaggcggacgtcttcttt gaggctttgcaactccaaccagtggctcttgaactatcttttatgaggactgatagagtc aatgtagacgaaaaagtttcaacccgtaatcccttctattatgctctaaatgccctaacc atgacgattggcaatgtcaacgcagccccgctggctttccgtgcccttttccttgaaaat gtgcgactgagcataccgtcgctccaagagcgcgtcatactgcattatcaagaacagttt atctctcaaatctatcgagtacttggctcagccgatttcttgggcaaccccgtcggcctc ttcaacaatattagctctggattttccgatattttctacgagccttatcacggtatggtt atgcacggcaacaaggatattggattgggaattgctcgaggtgcaacaagttttgccaag aaaacggtgtttggtatctcagatagcgtcaccaagtttacaggtagtattggaaagggt ttgtcagcagcaacgcttgatgcggagttccaaagcaaacggcggatgacacaaagacgt aacaaacccaagcatgctttatacggcgttgcagcgggtgcaagtgcgtttgccgatagc gttaccagcgcttttgagggtgtggcttcaaagcccatggaaggcgctgaaaagggaggt gctgcagggttcgccaagggtgtgggcaaaggtttcgtgggccttttcacgaagcccgct gttggcgtgatggatttcctatctgcttcgaccgagggcatacggaacaccaccacagtg tttgatcaggccgagcttgatagggtcaggcttccacgttacatagcatccgatggtgtt ctacgaccattctctgctcgtgaagcgcttggccaatcgtggctgaaggatcttgacgcc ggtgccttcttccacgattcttacattgcgcatatcgatcttcctggcgatgacgctata tctattctgtccaacaaccgcatcctccaagtgcaactcaggaaattgcgtgtcatctgg caagtgcctttcgaggaattacaatcattgtcgcttgaggccaatggtatcaatctggtg aatcgagatggacgaggtggaccgttcttgcccataccagatcagaaagctagggaatgg tatttcaagcagattggcaaggttgtggttgcttataataaagcacacagtcaaagggag gattga

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