Cryptococcus deneoformans B-3501A: CNBC5340
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Entry
CNBC5340 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb00280
Valine, leucine and isoleucine degradation
cnb01100
Metabolic pathways
Module
cnb_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CNBC5340
Enzymes [BR:
cnb01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
CNBC5340
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp_3
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
4935199
NCBI-ProteinID:
XP_776480
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All DBs
Position
3:1561851..1564759
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AA seq
733 aa
AA seq
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MRPIRGILINRGALAMPQYIKPHRLTRAHHMVAANRTPCGGQYSTVAQHGNLVHLFDGNT
ELKVGKRPFKKILIANRGEIACAIIRTARRLGIATVSVYSEADRNCQHVAMADEAYLIGP
SPSSESYLKMEKILHIAKLTGAEAIHPGYGFLSESSDFAEKVRDAGLIFIGPSAEAIKSM
GSKRESKEIMVAAGVPCVPGYHGADQSYDALLKGSQQTGYPLIIKPTHGGGGKGMRIVRD
PLTLQDELLSAQREALKSFGNDEVLLERWLEKPRHVEVQVFGDQFGNCVALWERDCSVQR
RHQKIIEEAPAPGLSPALKRDFAEKAVAAAKAINYVGAGTVEFIMDAETGEHFFMEMNTR
LQVEHPVTEMITGMDLIEWQLSIAAGNPIPYTQDKIPCIGHAFEARIYAEKPEYNFLPDT
GKLFHVRSPINTPHRLETGFQEGDEISSHYDPMIAKLVVHGKDRPQALSLLRSALAEYQI
VGPSTNIEFLKSVAEHDDFAAGSVETSFIPSHHDELFPPRVVPQDILAQAAVFLVLRAES
GQKSLAPAGPWASLVHRRFSDICTFSFRLDSEQVTVNPVESGYHVAIAGQDLYSQLIQSC
VTSSTEFSAQIGPKKIQSTIIPIFVNGLEKLHIFSSSSHYVITHHPSPLEGIEGPQSLSS
SGTGTLVSPMPATVIEVKVKKGDKVKENQVLCVLESMKMEINLRAERDGVVGEVRAEKGK
GVEEGEILVLLEP
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgacccataagaggtattcttatcaatcggggtgctctcgcaatgccccaatatatc
aaaccccaccgcctcacccgagcgcatcatatggtagcggcaaatcggacaccctgtggc
ggccaatattctactgttgctcaacatggtaatttggtccatcttttcgacggcaatacc
gagctgaaggtcggaaaacgtcctttcaaaaagatcttgattgccaaccgaggagagata
gcatgcgcgatcattcgtaccgctcgacgattgggtatcgctactgtttcagtatacagc
gaagctgatcgaaactgtcaacacgttgctatggctgacgaggcatacctcatcgggcct
tccccaagttcggagagctatctcaagatggaaaaaatactccatatcgcaaagctcacc
ggggcagaagcaatacacccaggatacggttttctttcagaatcttcagactttgcagag
aaagtgagagatgcaggtctcatttttatcggaccttcagcagaagcaatcaagagcatg
ggcagcaaacgtgagagtaaagagattatggtcgcggctggtgtgccatgcgtaccggga
tatcatggggctgaccaatcttacgatgcattgctcaaaggctctcagcagacaggttac
ccccttattatcaaaccgacacacggcggaggaggcaaaggaatgcgcatcgttcgagat
cctttgacacttcaagatgagctcctctctgcccaacgtgaagcactgaagagttttgga
aatgatgaagtcttgctggaaaggtggttggagaaaccaagacacgttgaagtacaagta
ttcggagaccaatttgggaactgcgtcgcgctttgggagagggactgttcagtacagaga
agacaccaaaaaatcattgaagaagcgccagccccaggattatcacctgcgttgaaacgg
gacttcgcagaaaaggcagtagcagcagccaaagcaatcaattatgttggggctgggaca
gttgaatttatcatggatgccgagacgggcgagcacttcttcatggagatgaatacccgt
ttacaggtagaacaccctgtcacagaaatgattacgggtatggatcttatagaatggcag
ctttctatcgcggccggtaatcctattccatacacccaggacaagatcccctgcatcggt
catgcgtttgaagcgcgaatctacgctgaaaagcccgaatacaattttttgccagacact
ggcaagctgttccatgtgcgttcgccaattaatacaccacaccggctggagacaggtttc
caagaaggcgatgaaatcagctcccattatgacccaatgattgccaaacttgtggttcat
ggtaaagatcggcctcaggctctgtcgcttttacgatcggcattggcggaatatcaaatt
gttgggccctccaccaacatcgagtttctcaagtcagtcgccgaacacgatgactttgca
gctgggtcagtcgaaacgagtttcataccatcacatcacgacgagttattcccaccacga
gttgtcccccaggacatcttggcacaagcggcggtttttttggttctccgagcggaatca
ggccagaaaagtttggcacctgctgggccatgggcatccttggtgcacagacgattcagt
gacatctgtacattctcatttcgactcgattcggaacaagtcaccgtcaacccggtcgaa
tctggatatcatgttgcaattgcaggtcaagacttgtacagtcagttgattcaaagctgc
gttacctcttccaccgagttcagtgctcaaatagggcccaaaaagatacaaagtaccatt
atccctatcttcgtaaatggtcttgaaaaattgcatatcttttcgtcatcatcgcactat
gtaatcacgcaccatccatcgcctctcgagggcatagaaggcccgcaatctttgtcttcc
agcggtacggggaccctcgtctcgcccatgcctgcaactgtcatcgaagtgaaggtcaaa
aagggggataaagtgaaggagaatcaagtgttgtgtgtgttggaaagtatgaagatggag
atcaatttgagagctgaaagggatggggtagtgggcgaagtgagggccgaaaagggtaaa
ggtgttgaagagggagaaattttggtactgttggaaccatga
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