Cryptococcus deneoformans B-3501A: CNBC5490
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Entry
CNBC5490 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
cnb
Cryptococcus deneoformans B-3501A
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cnb03016
]
CNBC5490
Enzymes [BR:
cnb01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
CNBC5490
Transfer RNA biogenesis [BR:
cnb03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
CNBC5490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
TAF4
Motif
Other DBs
NCBI-GeneID:
4935214
NCBI-ProteinID:
XP_776495
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All DBs
Position
3:1593459..1594560
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AA seq
325 aa
AA seq
DB search
MSPPPHSIPLYLVNGVATVWDAQTAATLHCVHNVSGLRAGTLPGVAQQNGFLGLPLTLMQ
EETAYLVTQGIAHLVPLDPSPSTPSDETVKAHTAARVARLKALEEKTREAEAKRLEESKK
AFDKGGEKARLKREARARAKAEKAKESGEGLFAEDVKENVTAPIVVSPAKTKTKHAGAPA
AGHFHIVPSHPVLSQHPPESQSITSLPHPLFPFPTTPRQCALLGVFSKLQSLSYRVGLGP
RFGGEWLIYPGDYLRYHAHFTSQVIVRDEPIRPTEIVAWGRLGTGTKKAGLICCWDDGKR
EDGQDDQGGKEEDVEFYSLEWANFG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctcccccccactccatccccctctacctcgtaaacggtgtcgccaccgtctgg
gacgcacaaactgccgcgactctccattgcgtgcacaatgtctctggtttaagagccggc
acactgccaggcgtagcccagcagaatggatttttaggtcttcccctgacattgatgcag
gaagagactgcataccttgttacccaaggcatcgcccatctcgttcctcttgatcccagc
ccatctacaccctctgacgaaaccgttaaagcccatacggcagcccgcgtcgcgcgtttg
aaagctttagaagaaaagacaagggaggcggaagcaaagagattggaagaatcgaaaaaa
gctttcgataaagggggagaaaaagcgaggctgaagagggaggcgagggcgagagcaaaa
gcagaaaaggctaaagaaagtggggaaggactgttcgcagaagacgtcaaggagaatgtc
actgcacccatagtggtttcaccggcaaagaccaagaccaagcacgccggcgcgcctgct
gctggccactttcacattgtcccctcccacccagtattatctcaacatccaccagaatca
caatcgataacatccctcccccaccctctcttccccttcccaacaaccccgcgccaatgt
gcccttctcggcgtattttccaagcttcagtcgctctcataccgggtcggacttggtccg
cggtttggtggagaatggttaatttatccaggagactacttgcggtatcatgcgcatttt
accagccaggtcatcgttcgagatgaacctatcagaccgaccgagattgtggcgtggggt
aggttgggtacagggacgaaaaaagctggattaatttgttgctgggatgatggtaagaga
gaagacggacaagatgaccaagggggaaaagaagaggatgtggaattctactcgcttgaa
tgggccaactttggatag
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