Cryptococcus neoformans var. neoformans B-3501A: CNBC6560
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Entry
CNBC6560 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
cnb
Cryptococcus neoformans var. neoformans B-3501A
Pathway
cnb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CNBC6560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnb03021
]
CNBC6560
Transcription machinery [BR:
cnb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
CNBC6560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
DUF6739
Motif
Other DBs
NCBI-GeneID:
4935324
NCBI-ProteinID:
XP_776267
LinkDB
All DBs
Position
3:1886298..1888781
Genome browser
AA seq
768 aa
AA seq
DB search
MSDATLFLRKNKDKQRRRNVSGASRIASTSNSSLASRPGASKGQPVAGPSSSGAPSSAAP
SPSSVSIKPEPDSSNNPNITEIKIFSTGSNSALRYNLMRLNSVKDVDPTQITAPVLMNRK
KPGPKDPPTFALDENGKIVGRYVYDEEGKPILDEEGQPVVERKEVVDMSLVGQAPGGGRK
KRVKRGTKEVFHQDIEIMRLRREEALPWVLESGNPQDKPAQPEQWVGRMLEQGQLSTVLL
SNDGTRDGFEMMPLGRSYKFEPARPFKPLDSDAANKLFELQAKNKIHDRWAFRPADNQSG
EASSASTPIQVKAEPNELEQRASRMETRIKMHKGVTVDRKAKVERYEDDYQREGHRVERG
MEGGVDEELDFDEAEEFQDDDDNNTFYRDAQEEEEARELEERLKKEFRVANANVGDRPQI
DAEDDEDDLFGDKSLDDEGKKLRKIMRRRMRENGEDYDIDDDSDSDSDDESTTSTQNKEK
EKEKDKEKEKAKEKDSSRNPSQPPSRPSSRPPTARTSSPSGSNPRYPSPKKGKASTAPPP
VSGASLIAQRATSRGASPRPSTHGGHVAGRASSPLGRVPSPAEGRGPGVTGQSQPASRAT
SPAVRESSPASGGAAATGGASPASGGPSTRDVSPAPPAGRPSPRKENAAVSTSSSSAKRK
SSPSVSTPSADAPPRPKKHKKTGSLTPAPAPEDIPPFSGMITKQDVLGWFQRNKKKAVPM
NEAIGAFRKRIVDAGPNRDANQKLFLGWIRMVADQENGNLSLKPEFRQ
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgccactctgtttctccgcaaaaacaaggacaaacagcgtcgcaggaacgtc
tctggcgcttctcgaatcgctagcaccagcaactcatcgttggcctcgcgacctggcgcc
tcaaaaggccaacctgtcgctggtccgtcatcctctggagcaccatcttctgccgctcct
tctccatcatctgtttcaatcaaaccagaaccggatagctcgaataatcctaatattacg
gaaatcaaaatcttctccactggttctaacagcgcattgcgatacaatctcatgcgcctc
aactctgttaaggatgttgatcccacacagataacagcgcctgtattgatgaacaggaag
aaaccaggaccaaaagatccccctacttttgcgctggacgaaaacggcaaaatcgtgggg
cggtatgtatacgatgaggaaggtaaacctatcttggatgaggaaggccagcccgtggtt
gagaggaaggaagtggtcgatatgtctcttgtgggacaagcgcctggcggtggcaggaag
aagagggtcaagaggggcacaaaggaggttttccaccaagatatcgaaatcatgcgtctt
cgacgagaagaagctctcccttgggtgctggagagtggcaacccccaggacaaacctgcc
caaccggaacaatgggtaggaaggatgttagaacaaggacagctatctactgtgcttctg
tcgaatgacgggacacgagatgggttcgaaatgatgccattgggcagatcctacaaattt
gaaccggctcggccttttaagcctttagactccgatgctgctaacaaactgtttgagttg
caggcaaagaacaagattcacgatcgatgggccttccgccctgcagataatcaaagcggg
gaagcatcctctgcttcgacgcctattcaagtcaaggcggagccaaacgagttggaacag
cgcgcatccagaatggagacgaggatcaagatgcacaagggcgttactgtcgaccggaag
gccaaggttgagcggtacgaggatgattatcagcgtgaagggcatcgagtggagcgtggt
atggagggtggcgtggacgaagagctcgatttcgatgaggcggaggaatttcaagatgac
gacgataacaatacattctaccgcgacgcgcaagaagaggaagaggccagagagttggaa
gaacggctcaaaaaggagttccgtgtggctaatgccaacgtcggtgaccggcctcagatt
gacgcggaggacgacgaagatgatctttttggagacaaatcacttgatgacgagggtaaa
aagttgaggaagattatgagaaggaggatgagggaaaatggagaggattatgatatagat
gatgactcggactctgattcggatgatgaatctacaaccagcactcagaacaaggaaaaa
gaaaaggagaaggacaaggaaaaagaaaaagccaaagaaaaggattcttctcgcaaccct
tctcaaccgccttcacgtcccagctctcgtccccctactgctcgcacatcgtcaccttcc
gggtctaatcctcgctaccccagtccgaaaaagggcaaagcctccaccgcccctcctcca
gtctctggcgcgtctctcatcgcccagcgcgccacctcgcgaggagctagccctcgtcct
tccacccatggaggacatgttgccggtagagccagtagccctcttggaagggtgcccagt
cccgctgaaggtcgtggtcctggtgtcacgggtcagagtcagcctgcgtcgagggctaca
agtcccgcggtcagagagagcagtccggcctcgggaggtgctgcagccaccggaggggcc
agtcctgcttccggagggccatcaacgagggacgtatctcctgctcctcctgctggtaga
ccgtctccgagaaaggaaaacgctgcagtctcaacatcgtcttcgtctgcaaagcgcaag
tcgtcaccttccgtttctactccatccgccgatgcacctccccgaccgaaaaagcacaaa
aagactggttcccttaccccagcgccggcaccggaggatattcctcccttctctggtatg
atcaccaagcaagacgttttgggttggttccagcgaaacaagaagaaggctgttcctatg
aatgaggcgattggagcgtttagaaagagaattgttgatgccgggcctaatagggatgcc
aaccagaagttgttcttggggtggatcaggatggtggcagatcaggaaaacgggaacttg
agtttgaagcccgagtttagacagtaa
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