KEGG   Cryptococcus deneoformans B-3501A: CNBD0830
Entry
CNBD0830          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cnb  Cryptococcus deneoformans B-3501A
Pathway
cnb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CNBD0830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cnb03041]
    CNBD0830
Spliceosome [BR:cnb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    CNBD0830
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EML PRP4 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_Vps41 WD40_like Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_DCAF12 WD_LRWD1
Other DBs
NCBI-GeneID: 4935472
NCBI-ProteinID: XP_776034
LinkDB
Position
4:287232..289205
AA seq 511 aa
MDLDDLITDNTYQLGGIDDERERAQNAAIIEELERKKRLRKLAVPTDDKKVRERLRAYGE
PITLFGEGPGDRRDRLKYVQEQIEQAKGEGGMVIDESEESSDEDEEGEFYTEGADDLLEA
RRKIARYSLSKARARIARQRREYSVPLGKLVNARKELFKELKSFNNFGSQFGDDRPLSTI
RFSPSSQYVLTTSWTGDTKLWDLPNLNPISTKRGHTEKVGGAAWHPFATVGASEEAVNFA
TGGGEGDVKLWSLSGEKPLSTLSGHTSRVGRLAFHPSGAYLASAGFDGTWRLWDVESSKE
LMIQEGHSKEVYALGCQDDGALIASGGFDAIGRVWDLRTGRTAMVLDGHVKEILAMDFAP
NGYQIATGSGDDTVRIWDLRALKTQYIIPAHKSSVADVKFFRSSGEMPPVGIQGLPLSSR
SANVDGMDVDKSNDTEDNEKEEKLSRSGMFLVTAGFDCNVRIWSADEWNMVRNLSTDAGK
VMSVDVSGDGKFVASASYSRSFHLFGGENSL
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggacttggacgacctcatcacagacaacacctaccagctcggcggcatcgacgacgag
cgggaaagagcacagaatgccgccatcatagaagagctcgaacgcaagaagaggttgcgc
aagcttgccgtccccacagacgacaagaaggtcagggagaggctcagggcgtatggagag
ccgatcacgctctttggtgaaggacctggagacagacgagaccgattaaagtatgtacag
gagcaaatcgagcaggcgaaaggggagggcggaatggtcatagacgaatcggaggagagc
agcgacgaagatgaagagggagaattctatactgaaggcgcagacgatttactcgaagct
cgtcgaaagattgcaaggtattctttatcaaaggccagagcacgaatagctcgtcagaga
agagaatacagcgttcccctgggaaaactcgttaatgctcgaaaggaattattcaaagag
ctcaaatcattcaacaactttggctcccaatttggagatgaccgtcccttatccaccatc
cgtttttcaccatcctcccaatatgtcctcacgacctcttggaccggcgacacgaagctt
tgggatctaccgaacctcaatcccatctctacaaaaaggggacacacggaaaaggtcgga
ggagccgcttggcatccgtttgcgacagtaggagccagtgaagaagctgtcaactttgcg
actggaggaggcgaaggcgatgtaaagctttggtctttgtccggtgaaaaacctctatcg
accctttcaggtcacacatcgcgagttggtcgactcgcttttcatccttctggagcctac
ctcgcttccgcaggttttgacggtacatggcgtctctgggacgtcgagtcgagtaaagag
ttgatgatacaagagggtcatagtaaagaggtctacgctttgggttgtcaggatgatggg
gcattgattgcttctggaggattcgatgccattggtagggtatgggacttgagaactgga
cgaactgctatggtcttggatggccatgtcaaagaaatacttgctatggactttgctccc
aatgggtaccaaatagcaacaggatcaggtgacgataccgtccgtatctgggatctgcgt
gcactcaagacccaatacatcatccccgcgcacaagtctagtgtggccgacgtcaaattc
tttagatcttccggtgaaatgccaccggtcggcattcagggattgccgctctcgtcccgc
tcggcaaacgttgatggtatggacgtggataagagcaacgatacagaagacaatgaaaag
gaagaaaagctgagtcgttccggcatgttcctcgtcacagccggatttgactgcaatgtc
cgtatctggtctgcagacgaatggaatatggtgcgcaacttgtcgacggatgcgggtaag
gtgatgagtgtggatgtctcgggagatgggaaatttgtggcgagtgcaagctatagtcga
tcgttccatctgtttgggggagagaactctttgtag

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