KEGG   Cryptococcus deneoformans B-3501A: CNBD1580
Entry
CNBD1580          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
cnb  Cryptococcus deneoformans B-3501A
Pathway
cnb03020  RNA polymerase
cnb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CNBD1580
  09124 Replication and repair
   03420 Nucleotide excision repair
    CNBD1580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cnb03021]
    CNBD1580
   03019 Messenger RNA biogenesis [BR:cnb03019]
    CNBD1580
   03400 DNA repair and recombination proteins [BR:cnb03400]
    CNBD1580
Transcription machinery [BR:cnb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     CNBD1580
Messenger RNA biogenesis [BR:cnb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CNBD1580
DNA repair and recombination proteins [BR:cnb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CNBD1580
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 4935547
NCBI-ProteinID: XP_776110
LinkDB
Position
4:482065..483088
AA seq 169 aa
MFFLRELTHTILLHPSYFGAQLEDYLRQKLYEDVEGTCSGKHGYIISVITITDIGEGKII
PSTGQAKFKTRYTAIVMKPFKGEVVDAKVVNMGFFAMVGPLQVFVSCHLTHSDMKFDPSV
SPPCYRSNDEIIQKDTKVRIQIVGCRVEANDMFAIGTIKKDYLGQIRDE
NT seq 510 nt   +upstreamnt  +downstreamnt
atgttcttcctgcgagaacttactcatacaatcctacttcatccatcctactttggtgcc
cagcttgaagactatctccgtcagaagctttatgaggatgttgaaggaacgtgtagcggt
aaacatgggtatatcatctcggtcatcaccataacagacataggtgaaggcaagatcatc
ccatcgacaggtcaagcaaagtttaagacaaggtatactgccatcgtcatgaagcccttc
aagggtgaagtagtggatgccaaggttgtcaatatgggcttctttgcgatggtcgggcca
ttacaagtgttcgtctcttgtcatcttactcactcggatatgaaattcgaccccagcgtt
tcgccgccatgctatcgttcaaatgacgaaattattcaaaaggataccaaagtgcgaata
caaattgtaggttgtagagtagaagcgaatgatatgtttgcgatcggaactattaagaag
gactatcttggtcaaataagagatgagtaa

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