KEGG   Cryptococcus deneoformans B-3501A: CNBD1960
Entry
CNBD1960          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K10739  replication factor A2
Organism
cnb  Cryptococcus deneoformans B-3501A
Pathway
cnb03030  DNA replication
cnb03420  Nucleotide excision repair
cnb03430  Mismatch repair
cnb03440  Homologous recombination
cnb03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CNBD1960
   03420 Nucleotide excision repair
    CNBD1960
   03430 Mismatch repair
    CNBD1960
   03440 Homologous recombination
    CNBD1960
   03460 Fanconi anemia pathway
    CNBD1960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cnb03032]
    CNBD1960
   03400 DNA repair and recombination proteins [BR:cnb03400]
    CNBD1960
DNA replication proteins [BR:cnb03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    CNBD1960
DNA repair and recombination proteins [BR:cnb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     CNBD1960
   MMR (mismatch excision repair)
     CNBD1960
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     CNBD1960
SSDB
Motif
Pfam: RPA_C tRNA_anti-codon
Other DBs
NCBI-GeneID: 4935585
NCBI-ProteinID: XP_776149
LinkDB
Position
4:577409..578577
AA seq 266 aa
MNNYDGQNPYYGGAGGGYVAGGSPYGSQDSPSRKARGGNQTIRPVTVKQILDAQQVHPDA
DFTIDGVDVAQVLLIGSVRNMSTTATNISYEIGDGTGYIDARVWLDSADDESGKTTGIEQ
DHYVGLMGTIKVFGGKRHVSATHIRPITDGNEVQHHLLKALYVSLILRGGTPGNAPKAAG
THDDYNAGATTGATDQSAWSHLEPLQRRILEVLSSEGQGNDDGVHVTHIIKFLNGADEND
FTVALDWLTDNGYVYSTLDESHYQVL
NT seq 801 nt   +upstreamnt  +downstreamnt
atgaacaactacgacggtcagaacccatactacggaggagccggtggaggatacgtcgcg
ggcgggtctccctacggcagccaagactcaccgagccgtaaagccagaggagggaatcag
actattaggcctgtgacggtgaagcaaatcctcgacgctcagcaagttcatcccgacgcg
gatttcacaatagacggcgtggacgtagctcaagtgcttttgatcggctctgtgcggaat
atgtcgacaaccgcgacaaacatttcctacgaaattggggacggtactggttatatcgat
gctcgtgtgtggctcgactcagcagatgatgagtcggggaagactacgggaattgaacag
gaccattatgttgggcttatgggcacaatcaaagtatttggcggcaaaaggcacgtgtct
gcaactcatatccgacctataacagacggcaatgaagttcagcaccatctcctcaaagct
ctctatgttagcttgatactgagaggtggcactcctggtaacgccccgaaagctgctggc
acccacgatgactacaatgccggagcgactactggcgcaactgaccagtctgcctggtcg
catctagagcctctgcagcgtagaattctagaagtcttgtcgagcgaaggacagggcaat
gatgatggtgtccatgtgacgcatatcatcaagtttctcaatggggctgatgaaaatgat
ttcacagtggcacttgattggttgacagataacggatatgtttattcgacacttgacgaa
tcccactatcaagttctgtag

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