KEGG   Cryptococcus deneoformans B-3501A: CNBD3500
Entry
CNBD3500          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
cnb  Cryptococcus deneoformans B-3501A
Pathway
cnb03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CNBD3500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cnb03009]
    CNBD3500
Ribosome biogenesis [BR:cnb03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    CNBD3500
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WD40 WDR55 EIF3I ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Utp12 NBCH_WD40 Beta-prop_IFT140_2nd Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_HPS5 Mycobact_memb
Other DBs
NCBI-GeneID: 4935739
NCBI-ProteinID: XP_775943
LinkDB
Position
4:complement(1013468..1016734)
AA seq 899 aa
MFVHTPSGALATPTVNITTSVGRSWLMWDAARMTLVFAGADTGNQINGLAMTGTDIYVSS
GSKVIKYHRGKEVASFLSPDGSTLGQILIFGDDFLVLKKDGSGMFVFDLATRHLRNQIAF
HSSFTASSLMHPATYLNKVLVGSKQGELQLWNVRTCALVHSFPHPTPFNPSSITTIVQTP
AVDVVGIGYLDGSIRIQDIKHGDLVMQMKIEDGAVSSMSFRMDGPSILATASSTGSISIW
DLSKGGRILHTLRGAHDQSISGLQWVSGQPLLVSSSLDNSVKQWLCDSPTGMPRLLKLRG
GHHAPPTCVRYYGEDGKQILTAGKDRALRYTSVVRDSRSFELSQGSLVKKAIGLGVTVDH
LKFPQITAISSSSMRSKDWEDVLTAHSEDAVARTWRVQEKRMGPWTFELEDGYAQSVCVT
ACGNFGIAGSSTGEIRMWNMQSGKERKSFALTGAAPGNSKPKIISQSTGMVKAKVRKPER
AKGNKSVQAITGLATDALNTILVASTLEGKLYFFDFHSTQKLDEVQIESSITAISLHRDS
GLLAATCDDLVIRLVDIESRRVVRELRGFKGRILDVVFTPDSRWVIATSLDSIIRTYDIP
TGKLIDAFKTSSIATSVTFSPTGDFLATAHVDSVGVHLWANRAQFTDVALRNLEEDDDVV
EVGLPTVQGLDADDAIEGIEDVGAPEFTDIYTTPDQIDESLVTLSLIPRSRWQMLLNLET
IKQRNKPKEAPKAPEKAPFFLPTISGLETQFDLSAVDKNRTEEELHKGKRLELDGSWLES
EFTRRLSVEDETGSYNTFFEYMKALPPSTLDLEIRSLISLTHLSSFINALTQRLKSHRDY
EAIQAIMSVFLRVHGDMLIANAELKEGLGALRLEQERESKRLRELVGYALGTLGFLRGA
NT seq 2700 nt   +upstreamnt  +downstreamnt
atgtttgtccatactccaagcggagcactcgctacgcccactgtaaacataacaacctca
gtgggaaggagctggctgatgtgggatgcggcaagaatgactttagttttcgctggggct
gataccggtaaccaaataaacggtttggcgatgactgggacagacatatatgtctcctct
ggctcgaaagtcatcaagtatcatcgaggcaaagaagtggcctctttcctctctccagat
gggtcgactctgggacagatattaatttttggtgatgatttcctggttctcaaaaaggat
ggctcagggatgttcgtgtttgatctggctactcggcatttgaggaatcagattgctttc
cacagttcatttacagcatcttcattaatgcatcccgccacctatttgaacaaagtcctg
gtaggcagtaaacagggtgaattgcagttgtggaatgtccgaacatgtgcccttgtccac
tcttttcctcaccccaccccatttaacccgtcttctataactaccattgtacaaacacct
gctgtcgatgttgtcggtatcggttatctcgacggatccatccgaattcaagatatcaaa
catggtgatttagtaatgcagatgaagattgaggatggcgcagtgtcctcaatgtcattt
cgaatggatgggccgtcaatcttagccactgcatcttcgacgggttcaatatccatttgg
gacctcagtaagggtggaaggatactacacacccttcggggtgcgcatgatcagagtatc
agcggcctccagtgggtttctggacaacctttactcgtatcttcaagtttggacaacagt
gtcaagcaatggctctgtgattctcctactgggatgccaaggctactcaagctgcgcggt
ggtcatcacgccccgccaacttgtgtcagatattacggggaagacggaaagcagattttg
acggctggtaaagatcgtgccctcaggtacaccagtgtcgttcgggactctcgaagtttc
gagctgtctcaaggatcattggtgaaaaaggctattggccttggggttaccgttgaccac
ctcaaatttccccagatcactgctatttcgagctcttccatgcgttctaaagattgggag
gacgttctcaccgctcattctgaggatgccgttgctcgcacttggcgtgtccaagaaaaa
cgtatgggcccatggactttcgagcttgaagatggttatgctcaatcggtgtgcgtaacc
gcttgtggtaattttggcattgcaggatcttccactggagaaattaggatgtggaacatg
caatcagggaaagagcgcaaatcttttgctctaacgggcgccgcgcctggtaactcgaaa
cctaaaattatctcgcaaagcacgggcatggtgaaggcaaaagtaaggaagccggaaaga
gctaagggcaataagtctgtgcaggctattactggtcttgcaacagacgcattgaacacc
atactcgttgccagcacacttgaaggaaaactttacttctttgactttcatagcactcaa
aaactagacgaggtgcaaatagagtcttctataacagccatctccctccatcgcgacagt
gggctgcttgcggcgacctgtgatgatctggttatccgtcttgttgacatcgaatcccgc
agggtcgttcgagaactaagaggtttcaaaggccgtatccttgatgtcgtctttacaccc
gattcccgctgggtgattgccacttctctggattctatcattcgtacctacgatattccc
actggtaaactcattgacgcgttcaagacatcttccatcgctaccagtgtgaccttttct
cctacaggtgattttttggccacagcccatgttgacagtgtgggagtccatctgtgggcg
aacagggctcagtttacagacgtggcattgaggaatcttgaggaagatgacgacgtcgtg
gaagtggggctgcccacggttcagggcttggatgcagacgacgctattgagggtatcgag
gatgtcggtgcacctgaatttacagacatctataccactcctgatcaaattgacgagtcg
ttggttactctctctcttataccgaggtcgcgatggcaaatgcttctcaacctcgagacc
ataaaacaacggaataaacctaaagaggctccaaaggcgcccgaaaaggctccgttcttc
ttgcccactataagcggacttgagactcagttcgacttgtcggccgtcgataagaaccgg
acagaggaagaacttcataaggggaagaggctggaactggacggtagctggttagaaagc
gaattcacgaggagattaagtgtagaggatgagactggaagctacaacaccttttttgaa
tacatgaaggctttacctccctccactcttgacctcgaaattcgatcactcatctctctc
acccatctttcctcattcatcaatgcgctcacccagcgactcaaatcacaccgagattat
gaagccatccaggcaattatgtctgtctttttgagagtgcacggcgatatgctgattgcc
aatgccgagttgaaggaaggactcggagcattgagactagagcaagaaagagaaagtaag
aggctaagagaacttgtgggatatgccttgggtaccttgggtttccttcgtggcgcttga

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