Cryptococcus deneoformans B-3501A: CNBD4440
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Entry
CNBD4440 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K12897
transformer-2 protein
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNBD4440
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cnb01009
]
CNBD4440
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnb03041
]
CNBD4440
Protein phosphatases and associated proteins [BR:
cnb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CNBD4440
Spliceosome [BR:
cnb03041
]
Common components
Common spliceosomal components
SR proteins
CNBD4440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
YflT
Motif
Other DBs
NCBI-GeneID:
4935833
NCBI-ProteinID:
XP_775715
LinkDB
All DBs
Position
4:complement(1275353..1276942)
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AA seq
253 aa
AA seq
DB search
MSDPNDVWKDSSATNGAPVDSYARESSPRRETRGDDARSPRRDRSRSPARAPERADRGRG
DGPNTVNQGNNLHVSGLSRAVTERQLEDLFSQIGKVAKVQIMVDPHSQESRGFGFVMMES
PEEAQAAIDQLSGQNVEGKSITVAHARRGRARTPTPGRYHGVKADSRPQHSSYDRPYQPR
SYDSRYYDRPPPRAYDERDRYDRRDRYDDRRYDDRYARDRYDDYYRSSGGAPERDSRYER
REERPRYDERPRY
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccccaacgacgtctggaaggattcctctgctaccaatggtgctcctgtcgat
tcttatgctagggagagctctcctcgacgtgaaactcgaggtgacgatgccaggagccca
agaagggataggagtaggagtcctgccagggcccctgagagggctgataggggacgcggt
gacggacctaacactgtcaaccaaggtaataaccttcacgtcagtggcttatctcgtgcc
gttaccgagcgtcagcttgaagatttgttcagccaaattggcaaggttgccaaggttcag
atcatggttgacccccactctcaggagtcccgtggcttcggttttgtcatgatggagtcc
ccggaggaggcgcaagctgcaattgaccagctttctggccagaatgtcgaaggcaagagc
attactgttgctcatgctcgacgaggtcgagctcgtacacccactcctggccgatatcat
ggtgtgaaggccgatagccgacctcagcacagctcttatgacaggccgtaccaacctagg
tcttacgactctcgatactatgaccgacctcctcctcgggcttacgatgagcgtgacaga
tatgaccgtcgggaccggtacgacgaccgaaggtatgacgatcgttatgctagagaccga
tacgatgactactaccgaagcagcggtggtgctcccgaacgcgacagtcgttacgaaagg
cgagaagagaggcccagatacgatgagaggcctaggtattag
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