Cryptococcus deneoformans B-3501A: CNBD4630 Help Entry CNBD4630          CDS       T01040                                  Name (RefSeq) hypothetical protein   KO K12600   superkiller protein 3 Organism cnb  Cryptococcus deneoformans B-3501A Pathway cnb03018   RNA degradation Brite KEGG Orthology (KO) [BR:cnb00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     CNBD4630  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cnb03019]     CNBD4630 Messenger RNA biogenesis [BR:cnb03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Ski complex      CNBD4630 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_1 TPR_2 TPR_8 TPR_19 TPR_16 TPR_12 TPR_17 TPR_CcmH_CycH TPR_14 TPR_11 TPR_9 TPR_6 ANAPC3 TPR_7 E_motif NatB_MDM20 HrpB1_HrpK ARM_TT21_C Sel1 Motif Other DBs NCBI-GeneID:  4935852 NCBI-ProteinID:  XP_775734 LinkDB All DBs Position 4:complement(1327966..1333127) Genome browser AA seq 1535 aa AA seqDB search MATKNALKSIKAHLGEKNSESALYEATELLKSIGPDSPEADQVLVFRGLALTQLQRLDEA EKSYLHAYKLNPNNPLASVGLRRLYHKNQSWEKLATFLEVQVQTTFEKQDDEKLAEVLKE LLEVREQHGPEEKLYRTLDLLLPSSPVAGLLQSVTPPQGTYIPLAIPVYPSASDILPTLP SPLPHPVHLAGSLSLALVSLIRSEIEIKQKIDARVNNERKRLGAGTEKDVRRKVDREILG TEGMRLVDLWKEIAGHPQVEEEIRREVEIREFEFWRRLVAALPVENKIASKESAGKASQA EMPANASNELVEPALFKAKQYVAPNRTEALSHVNALADGFVLLDISAKGAEEGWRWVLEG KDEPTLFYDIDLLHKYSEAFPNSPMACFIEEYCRWFKRPLPETEEDSSKTEAYERDEKAE GSVKHRKSHKGGRGALTKRQSRRAHLREIHVSEDVEKEEREELFSSMTKLVDQLPMSIFA HRVMARIALEDEDWSSAISFAEKARKLLTGLEAERGITLSNVRADLDTVLGVALVPHYPP KHHVRAARILETVLKIHPTNNEARFARAQIYETAGQWSDARHHFEKIVQDGGSEKERLDS KEEVGWCLANEGKLEEGRDILEEVIEVRDTKTEKEKEAEARERGRTWWRLGRTEWMIGDE ESKQHAEEWFMASVRAHPDFAASYTSLGVCYSSATPPDNERALKCFQRAFELDATETDAA YRLANGYADEDEWARVRTIAVRVMEGEGGLEGVAGGDVLNAKGRFAPQNGWAWKALGSSE MHYKKYAEAAAAYQIALRADDQDVSTWIMLGESYVKCGRHMAGLKTFDHALTLDPDNWRA LYNIGQTQSQLGAFDKAIEAYQKVLEITQDEDVGVIAALAEANLSLGRQTGTGGFRERSR GAFHRAIELAMKVLKSGKAHKAWGWKLIGDATYELSGQESNIEEAQDSFTVVQPVLIFLV EDDTDHVVSTTTSLRASIFAFAYRAHILKNEPRVIDPALYDYASALHTLAGKLIESDERK QCLKTAISAVRAALDRNAGDERLWNALGVICATAGPQVAQHAFVVSLELYSKDPVVWVNL GYLYLHLDDLDLANQCFLKAQIIDPDSARAWYGQGLLADRHGDKEHAKALFSHSVTLSAQ SLLEADLALAAATFAQFFRPNASVDSSLLHQPAFALKHYCHQRPRDSTAAHLYALICERL GLVEEAALSLENAAAVLEEEFERVESGEIENLYSVALCNLGRVRLSAGVYLESLDALNNC WELIASSSEPSAVSLKPQCKLLQGLAFYWLGQIDESLEAFQASLDAATQNQDYDVKEKVA VLLSRTLWGLGGNDAKETAKSNLMECLARERPSLGVISTLAAIALVSSDADLTNAAVSEL LTRPIAERVQDPSGQANLVLYLQAISEGREEDAYNTLQSASQAAPASRSIRNRLVEALIK AGKSKEALDVLAVKNVKEGTAEVKAKEERLLGIGELMEGDAKGMKGVVRSVMLAPWEDES WQALAWGKKVVEEAGLIETKDGAKDDAATKLDLTE NT seq 4608 nt NT seq  +upstreamnt  +downstreamnt atggctacgaagaatgccctcaagtctatcaaggctcacttaggagaaaagaactccgaa tccgctctctatgaggccaccgaacttctcaagtccatcggcccagactcaccagaagct gatcaggttctggtctttcgagggctcgccctcactcaacttcaaaggctggacgaagcg gaaaagtcatatcttcatgcttataaattgaatcccaacaatcctctcgcatccgttggg ctacggcggctgtaccacaaaaaccaaagttgggaaaagcttgcgactttcttagaggtg caagtgcaaacgacgtttgagaaacaggatgacgaaaagcttgcagaggttcttaaagaa ttattagaggtcagagagcaacatgggcctgaggaaaaactttatcggactcttgatctt cttctcccttcatcgcctgtagcggggcttttgcagtcagtgacgccaccccaagggact tacattcctctagccatccctgtctacccatcagcatctgacatcctgccgactcttcct tcccctcttccccaccctgttcaccttgctggatctctttctctcgcattggtatccctg atccgctcggaaattgagattaaacagaagatcgatgcacgggttaataatgagcgcaag cgcctaggtgctggaacagagaaggatgtcaggaggaaagtcgacagagaaatactcgga acagaaggcatgaggctggtcgatctctggaaagagattgcaggtcatccacaagtggaa gaggagattcgaagagaggttgaaattcgggaattcgaattttggaggagactcgtcgct gctcttcctgtcgaaaataaaatagcttccaaagagtctgctggtaaagcctcacaagct gagatgccggccaacgcctccaacgaacttgttgagccggcgctcttcaaagccaaacaa tatgtagctccgaatcgcacagaagctctctctcatgtcaatgcgctcgccgatggcttc gtcctactcgatatctcggccaagggcgccgaggagggctggcgatgggtgttagagggc aaagatgagcctactttgttctatgatattgatttgcttcacaagtattctgaagcgttt cccaactctcctatggcatgctttatagaagaatactgccggtggttcaaacgtcctttg ccggaaacggaggaagattcttcaaaaacagaagcatacgaaagagacgagaaagccgag ggttctgtaaagcaccggaagagtcacaagggcgggcgaggtgctttaacaaagagacaa tctcgtcgagcccatctgcgggaaatccatgtgtcagaggacgttgaaaaggaggaaaga gaggagctgttctcgtcgatgactaaacttgtcgaccaacttccgatgtccatttttgcc catagggtgatggcgagaatcgcgcttgaagatgaagattggtccagcgcgataagcttt gctgagaaggcccgcaagcttcttaccggactggaagctgagagaggtatcactctttcc aacgttcgcgcagacctcgatacagttctgggcgtagccctcgtcccgcattaccctccc aaacaccatgtccgtgcagcgcgcatccttgagacagtgctcaaaatccatccgaccaat aatgaggcccgttttgcccgtgcacaaatttacgaaactgccggccaatggtctgatgct cgtcatcatttcgaaaaaattgtccaagatggcgggagcgaaaaggaaaggttggattca aaggaagaagtcggctggtgtttggccaacgaaggaaagctcgaggaagggagagatata ttggaggaggtcatagaagtcagagacaccaagacagaaaaagaaaaagaggcagaagca agggagagggggaggacttggtggagattgggcaggactgagtggatgatcggagatgag gaaagtaagcaacatgccgaagaatggtttatggcatctgtccgtgcacacccagacttt gcggcgtcttacacttcccttggagtctgttactcatccgcaacccctcccgataacgag cgtgccctcaaatgctttcaacgagctttcgagcttgacgccacagaaactgatgccgct tatcgactggcaaatggatacgccgatgaagatgagtgggcaagggtgaggacgatcgcc gtgcgtgtgatggaaggcgaagggggtctggagggtgtggcgggcggggacgtattgaac gctaaaggaagatttgctccgcaaaatggttgggcttggaaagcactcggctcttccgag atgcattataaaaaatatgctgaggccgccgccgcctatcagatcgctcttcgtgccgat gatcaggatgtatccacgtggattatgttaggcgagagttacgtcaagtgcgggcgacac atggcaggactcaagacatttgaccatgccctaaccctcgatcccgacaactggcgcgct ctctacaatatcggtcaaactcaaagccagctcggcgctttcgacaaagccattgaagcc tatcagaaagtcttggaaatcacccaggatgaggatgttggtgtaattgcggctttggcg gaggcgaacctttctctcggacgacagaccggaacgggaggctttagagaaaggtcaaga ggagcattccatcgagcgatcgagttggctatgaaggtgctcaagtcaggaaaggctcac aaggcatggggatggaagcttattggcgacgctacctatgaattgagcggacaagaatca aatattgaggaggcgcaggattcgtttacggttgtacaaccggtgctgattttccttgtt gaagatgacaccgatcatgttgtctccaccaccacttctctccgggcttcgatcttcgct ttcgcgtatcgtgcccatattctcaagaacgagccccgtgttatcgatccagcattgtat gactatgccagcgccttgcatacattggctggcaaacttatcgaaagcgatgagaggaag caatgtcttaagaccgctatcagcgctgtaagggcagctttggataggaacgcaggcgat gaaaggctttggaatgctttgggtgtgatttgtgcgactgctggcccacaagttgctcaa cacgcttttgtagtgtctctcgagctctacagcaaggatccagttgtttgggtcaacttg ggatacttgtatctgcatttggatgatctcgatctcgccaatcaatgtttcctcaaggct caaatcattgatcccgattctgcgagggcttggtatggacaaggcctgttagctgaccga catggtgataaagagcatgccaaggcactcttttcacactcagtgacactctcagcccaa tcccttctagaagcggaccttgctcttgcagcggcgactttcgcccaattcttccgcccc aacgcttctgttgattctagtcttcttcatcaacccgcgtttgccctcaagcattactgt catcagcgcccgcgcgattccactgctgctcatctctatgctctcatatgcgagcgattg ggtcttgtcgaggaagcagcgttgtcacttgaaaatgccgctgctgtgttggaagaggaa tttgagcgagttgaatcgggggaaattgaaaacctttattctgttgccctttgcaacctc ggtcgagttcgcctttctgctggcgtgtacttagaatctcttgatgcgctcaacaactgc tgggagctcattgcgtcttcatctgaaccgagtgcagtttctctaaagccgcaatgcaag ctcctgcaaggtttggcattctactggcttggacagattgatgaaagcctggaggcattc caagcaagtttagacgcagcgacacagaatcaggactacgatgtcaaggagaaggtggca gtgctcctgagtagaacgttgtgggggttgggagggaatgatgcgaaggagacagcaaaa agtaacctcatggaatgtttggctcgagaaagaccatctcttggagttatctctactctg gcggccattgcgctcgtatcctccgacgcagatcttactaatgctgctgtctccgagctc cttactcgacctatcgcggagagagtacaagatccttctggacaggccaatctcgtgctc tatctacaagctatctctgagggtcgagaggaagacgcctacaatacattacagtccgct tctcaggccgcaccagcatctcgaagcatacggaaccgccttgtagaagccctcatcaag gctggcaaatcaaaggaagcgcttgatgttctcgctgttaaaaatgttaaggaaggaact gctgaagtcaaagccaaggaggaaagattgcttggcataggagagttgatggaaggagat gcgaaggggatgaaaggagtagtcaggagcgtaatgcttgcaccttgggaagatgagagc tggcaggctttggcgtggggaaagaaagtggttgaagaggcgggcttgattgagaccaaa gatggggcgaaagatgacgccgcgactaaattagatcttacagaatga

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