Cryptococcus deneoformans B-3501A: CNBD5020
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Entry
CNBD5020 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K14312
nuclear pore complex protein Nup155
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNBD5020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnb03019
]
CNBD5020
Messenger RNA biogenesis [BR:
cnb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CNBD5020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
4935891
NCBI-ProteinID:
XP_775773
LinkDB
All DBs
Position
4:1422248..1427082
Genome browser
AA seq
1327 aa
AA seq
DB search
MLSSLPSLSRLSHIADSSHSQQANQYSTQIMPSSNQVQPYLSGQVGVPVQQGVYPQLPGT
QPYPQTPYNPYGGTAPGMGTVGAPISQNQALSQPFAPGSGAVGQPYPSQPVAQWNRYITP
LQAPQSLESVSKDEDPIYGPLGRASGKVERGLRGDVDISADLEEKLGPSAQIQDPYAAPP
SASAAYKCCSVTKRTPLPDALHQELNFKHLTAKMGLFEEIERAWFTVDNKLFLWDYGDGR
DFSRYDEQTDTIQAVGLVKARKDVFVDDITHVLVICTSTKATLLGLSRSLTSREILLYHT
NLTVDTPTVMVDIKGTDEGRVFVLGANKDLYELDYSSDSSWLFGSSTSVRLKNRTSGGVS
NWVPSVVASKVKAGIESFAVDSQQKRLYTLHTGGEIEFYDVSANRFDLRSKYNRLKHDLN
RDPRGGAVTIVSISAIGGHESKRACLVAIASNGVRAYFVSTPSFYPIILRAPPPLQLGLS
VSDQSIYTSGTFIAVQYDPNAPLTQTHLTFAIPQSGRQSALRENYETLEPPVFQEWTATE
IVPSQVWAIVELSDANPKNSPASLRRSDGLALSALPRQAEAGPRGFLVLAASGLFWVDQP
RPVDILKANLEIEKDVAVNTIRMTFGKTQLAAMALLLGSTPETKHPDLISSLSTILLTSG
EPVVKDSTGGKTITYSSRHDGLALAIARYLRPIWSAKVTLPLVGGKQILGIKETVLSKVQ
ANLESLRRYLEEHPFQSYQVEGEAKIAWAQEEMSLHGLNILLKQAVEAISFVLLLSDYKI
TDIVAKCDPVTQSALASLTFESLITSLDGRAVARKLVTALIEQQIGQELGIDTLSEILQQ
RCGTFIQPGDVVQYKAEESMRRAEATRDPLEKTESLAESLRLFIRAAGSIPIPRLQEVSE
RYRTLNYTLGAIELALRTASDLDPHKKAIDFVRDGEHPADPRKALFEARKECYAEVIKAL
KVADDRLDKAVAEGDAATATQNRNEAYALAIASDDELFHFYLYDWQVERGLQEQLLEFDT
PFIEDYLKITISNVEDRRDLLWKFYARREQYLPAAEALSSLATRPSPMPLHDRLYYLAQA
LTSAKSAASLGSEDVEFTSRLQEQIDVAQVQMEVARAVEVHPEMTGEEKLEVLASLNDGL
LQLDELYQNYARPFRLYEPILLILKTADTRVDDVCEAVWRQLLGSAGKIGGAAGVSEVVK
SLGRRYFPSEAAPMDIMIPVVYAEAAGYPGSPGWASTTLLDAGVPLRDLWEAVTGLYENS
DDEEREFYAEQISILAQRWMSQMDEIPAAEIERFASAYILRTNGASDDSTRAIRDKLLAA
KQAAVKY
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcctctctcccttctctatctcgtcttagccacatcgccgattcttcccatagc
cagcaggccaaccaatattccactcagatcatgccctcttcaaaccaggtccagccctat
ctctccggacaagttggcgtgcctgttcagcagggagtttatcctcaattacccggtact
cagccttaccctcaaacaccgtacaacccttatggcggcactgcacctggtatgggcaca
gttggagccccaatctcccagaaccaagctttatctcagccttttgcgcctggttctgga
gccgttggacagccatacccatctcagcccgtcgctcagtggaaccggtatatcacccct
ctgcaagcgccccagtctcttgagagtgtatccaaggacgaggatcctatctatggacca
ttgggaagagctagtgggaaagttgagagaggtttgaggggcgatgtggatatcagtgcc
gatttggaagagaagcttggtcctagcgcgcaaatccaggacccttacgctgctccccct
agtgcttccgcggcatacaaatgctgctctgtcaccaagcgcactcctctcccagacgct
ttgcatcaagagctcaactttaaacatttgactgctaagatgggactttttgaagagatt
gagagagcatggttcacggttgacaacaagttgttcttatgggactacggagatggtcgc
gacttcagccgctatgacgagcaaacggataccatccaggccgtaggccttgtcaaggcc
cgaaaagacgttttcgtggatgatattacccatgttcttgtcatctgtacttccactaaa
gccacccttctcggtctctcacggtccctgacatctcgcgagatccttctgtatcacacc
aatcttaccgttgatactcctacagtgatggtggacatcaagggtaccgatgaggggagg
gtcttcgtgcttggagctaacaaggatctctatgagcttgactactcttctgacagctca
tggctgtttggaagttcgacaagtgtcagactgaagaataggaccagtggaggtgtgagc
aactgggttccaagtgttgttgcgtcgaaagtgaaagctggtattgaatcatttgcggtg
gattcccagcaaaagcgtctctacactctccacactggtggagagattgaattctacgat
gtctctgcaaaccgattcgatcttcgttccaagtacaacagattgaagcacgatctgaac
cgggatcccaggggcggcgccgtcactattgttagcatctctgccattggtggtcatgaa
agcaaaagagcctgtctagttgccatcgcatcgaatggtgttcgagcctattttgtatct
acaccctctttttaccccatcatcttgcgggcccctccacctcttcaacttgggctttct
gtatctgaccaatccatctacacctctggcacttttatcgccgtgcagtatgaccccaac
gcgcctcttacccagactcacctcacttttgccatccctcagtccggtcgacaatcagca
ttacgggagaactatgagacccttgagcctcccgtgttccaagagtggactgccactgag
atcgtgcctagccaagtttgggctattgtagagttgagcgatgcgaaccctaagaactca
cctgccagtttgcgacgctcagatggccttgctctgagtgctttgccgaggcaggctgaa
gccggccctagagggttcctggtgcttgcagctagcggattgttctgggtcgatcagccc
aggccagtcgatatcttgaaggcgaacttggaaattgagaaggatgtagctgttaacacc
atccgtatgacgtttggaaagactcagcttgctgccatggctttgctgcttggttccacc
cccgaaaccaagcatcccgatcttatttcatccctttctaccatacttcttacatctggc
gaacccgtagtcaaggacagtactggaggcaagaccataacctattcttcccgacatgac
ggtttggccttggctatagctagatacctcagacccatctggagcgccaaggtgacgttg
cctcttgtgggaggaaaacagattttggggattaaggaaaccgtcttgagcaaggttcaa
gctaatttggagagcttgagacgatatcttgaagagcaccctttccagagctaccaagtc
gaaggcgaagccaagatcgcttgggcccaagaagaaatgtctctccacggtcttaatatc
ttgcttaagcaggctgttgaggcgatttccttcgttctgctattatcggactacaagatt
actgacatcgtggccaaatgtgatcctgttactcaatcggcattggcaagtttgaccttt
gagtctcttatcactagcttagacggaagggctgttgcgcgaaagcttgtgacagctttg
attgagcagcaaatcggccaagagctaggcattgacaccttgagcgaaatccttcagcag
cggtgtggaacctttattcaacccggcgatgtcgttcagtacaaggcggaggagtcaatg
cgacgtgctgaagcgactcgcgacccactcgaaaagacagagagtcttgcagagtcattg
cgcctctttatcagagctgcgggaagcatacctattcctcgactgcaagaagtgtctgag
agatacaggactctcaactatactctcggcgccatcgaacttgcactccgcactgccagt
gatcttgaccctcataagaaggccatcgacttcgtgcgcgacggcgagcaccctgctgac
cctagaaaggcgctgtttgaggcgcgaaaggagtgctacgctgaggtcatcaaggctttg
aaggtggcggacgatcgattggataaggcagtagcggagggtgacgcggctactgctact
caaaatagaaacgaagcgtacgctcttgctatagcatcggacgacgaacttttccatttc
tacttgtatgactggcaagtggaacgaggtcttcaagaacaactccttgagttcgataca
cccttcattgaagattacctcaagatcaccatcagtaacgttgaagacaggagagacttg
ctgtggaagttctatgcccgacgagagcagtacttacctgccgccgaggcgctctcaagt
cttgctacccgtccaagccctatgcctcttcacgaccgcctttattaccttgcccaagcg
ctcacgtctgccaagtccgccgcttcgttaggttcagaagatgtagagttcacaagccgt
cttcaagagcaaattgacgtcgctcaagtccagatggaagtggcacgtgcagttgaggtg
catcctgagatgactggcgaggagaagctagaagtcttagcgagtctgaacgatgggctg
ttgcagcttgatgaactgtaccaaaactatgctcgaccctttaggctctacgagcctatc
cttttgatcctaaagaccgccgacacccgcgtagatgatgtctgcgaggctgtctggaga
caattgcttggcagcgcgggtaagatcggtggagcagctggcgttagtgaagttgtcaag
agtctgggacgcagatacttccctagtgaagcagctcctatggatatcatgattcctgtt
gtgtatgccgaggctgctggttacccaggatctcctgggtgggcatctaccaccttgctt
gatgcgggagttcctttgcgagacctttgggaggcagttactggactgtatgaaaactct
gatgacgaggaaagagagttttatgccgaacagatctccatactcgcccaacgatggatg
tcacaaatggatgagatccctgcggcggagattgaacgttttgcttctgcttatatctta
cggacgaacggggcatcagatgattctactagagcaatcagggataagctccttgctgct
aagcaggcagcagtgaaatactag
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integrated database retrieval system