Cryptococcus deneoformans B-3501A: CNBD5690
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Entry
CNBD5690 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K24752
WD repeat-containing protein 70
Organism
cnb
Cryptococcus deneoformans B-3501A
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cnb04121
]
CNBD5690
03036 Chromosome and associated proteins [BR:
cnb03036
]
CNBD5690
03400 DNA repair and recombination proteins [BR:
cnb03400
]
CNBD5690
Ubiquitin system [BR:
cnb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
CNBD5690
Chromosome and associated proteins [BR:
cnb03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
CNBD5690
DNA repair and recombination proteins [BR:
cnb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Others
CNBD5690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
PD40
Beta-prop_WDR19_1st
eIF2A
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Ge1_WD40
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_IFT140_1st
SUKH_6
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
4935958
NCBI-ProteinID:
XP_775615
LinkDB
All DBs
Position
4:1625208..1627232
Genome browser
AA seq
550 aa
AA seq
DB search
MEGFDLPMSFGKKSKAGNSNLKAKVENTKRADIPTPVKEEKPEEEVPGPSISTSGRKTEA
EEEDDEEIGPIPPSATGKRKAEENDESDDEQEAEEEVDRLPISHEIILKDHTKVVSALAV
DPSGARIATGSHDYDTKLWDFGGMDHRLKPFKSFEANGNYYVHDLSYSPDGQQLLVISGT
VHPKVFNRNGEDEMEFNKGDVYLRDMKNTNGHTAEINAGAWHPTDKSIFLTCSNDSTLRI
WDTSNKRKQKQVIVVKSKERGARTKVTACAWSPDGKWIAGVCLDGTLHIWDTSSNFARPK
YSCENAHPKNTDTTGVAFSRDGLRVATRGGDDTVKLWDIRSIRNPLAVAKNLDNLYPETN
IIFSPDDTQILTGTAAPKGQKGGLVFLNSKDLKEERRIAIGDGSVVRVLWHSRINQIFAT
LSTGGVHVLYSPNSSIHGALLPLAKLPKTAPRDPSFSTVDLKPVIYTPDALPMYQEQGHR
ESLHQKEKKAKKMKPMEPVSGVGRAGRLGASETQSFVHSMYPETLKFEDPREALLKYASK
EEQEKKKQEM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggagggcttcgacctccctatgagttttggcaaaaaatccaaggcaggaaactcgaac
ctcaaggcgaaggtggagaacacgaagcgagcagacatccctacaccagttaaagaagaa
aagcctgaagaagaagtaccaggaccttcaatatctacatcagggaggaagacagaggcc
gaggaggaagacgacgaggagattgggcccataccgccttctgcgactggaaagcgtaag
gctgaggagaatgatgagagtgatgatgagcaagaggcagaagaagaggttgataggcta
cctatatcgcatgagattatcctgaaagatcacacaaaggtcgtctctgcccttgcggtc
gatccttctggtgctcgtatcgctactggttcgcacgactatgatacgaaactctgggat
tttggtggtatggaccatcgcttaaaaccattcaagagctttgaagcgaatgggaattac
tacgttcatgacttgtcatactctcctgacggccaacaactccttgtaatatcgggaact
gtgcatccaaaagtgtttaaccgtaatggtgaggacgagatggaattcaacaagggtgac
gtctatctgcgcgatatgaagaataccaatggccatactgccgaaatcaatgctggtgct
tggcaccctacagataaatccatcttcctcacctgctccaacgactctacactcagaata
tgggacacatcaaataaacgaaagcagaaacaggtcatcgttgttaaatccaaagaacgt
ggtgcccgaactaaagtgacggcctgcgcttggagtccagatggtaaatggatcgctgga
gtttgtttggatggaacattgcacatctgggatacttcgtcaaactttgcgcgaccaaaa
tattcttgcgagaatgcccatccaaagaacactgacacgactggtgtcgcattctccagg
gatgggctcagagttgctactcgagggggggacgatacagttaagctttgggacatccgc
tcaattcgaaaccctctggctgtcgctaaaaacctcgacaatctttaccccgaaactaat
atcatcttctcccctgacgacacccaaatcctgaccggtaccgctgctcccaagggccaa
aaaggcggcttggtattcttgaacagcaaggacctgaaagaagagcggcggatcgctatc
ggggatggaagtgtagtgagagttttgtggcattcacgtatcaatcaaatcttcgccacc
ctctccacaggcggtgttcacgttctctattctcccaattcatctattcacggtgccctt
ctccctctcgccaagctccccaaaaccgccccacgcgatccatccttctccactgtcgat
cttaaacccgtcatctacactcctgatgctttaccgatgtatcaggaacaaggccatagg
gagagtttgcatcagaaggagaagaaggcgaagaagatgaagccgatggaacctgttagt
ggtgtgggtagggcaggaaggctaggagcgagtgagacgcagagctttgtgcatagcatg
taccccgaaacgctcaaatttgaggatccgagagaagcgttgctcaagtacgcgagcaaa
gaagaacaggagaagaagaaacaggagatgtag
DBGET
integrated database retrieval system
