Cryptococcus deneoformans B-3501A: CNBE0960
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Entry
CNBE0960 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K18752
transportin-1
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNBE0960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnb03019
]
CNBE0960
03009 Ribosome biogenesis [BR:
cnb03009
]
CNBE0960
Messenger RNA biogenesis [BR:
cnb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
CNBE0960
Ribosome biogenesis [BR:
cnb03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
CNBE0960
Pre-60S particles
CNBE0960
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_2
TOR1L1_N
HEAT_GCN1
HEAT_EF3_N
Vac14_Fab1_bd
TPR_IMB1
Cnd1
TPR_DNAAF5
HEAT_MROH2B_C
MMS19_C
IBN_N
PIK3R4-like_middle
PDS5
VHS
TPR_TNPO3_IPO13_3rd
CandA_N
Motif
Other DBs
NCBI-GeneID:
4936101
NCBI-ProteinID:
XP_775380
LinkDB
All DBs
Position
5:<264109..>267189
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AA seq
924 aa
AA seq
DB search
MAWQPSEQGLQEVLGMLRDTSSVDSEVQRNVAQRLEQLRFVPDFLAYLAHVLIHCTGEQD
SHRAVAGLLLKNSLNQRSGPTTNENDARAMAYVKNTVLTGLADPDQIVRQTVGTVIMCLI
SNEDVGAWPEALDALTKGMGSTDPNVVEGSFNTLQKICEDAPHKLDFQVQGRDLLDHLVP
QFIEFTNHNVNKVRLYALQILQSLLSIGIAAVTANIDNYIRALFNKASDPSPDIRKSVCA
SLGLILGSRPDKLVPEMGNVVDYIVFCTQDDDETVALEASEFWLTFAEDASLKDQLRPYL
PKVAPLLLNKMVYSDYDIAVLDMDEYDEDVADKETDIKPRNYSSKVHAAHESNDPSSSKG
AGFSREAADRAFEEDDEEEDEEDDDFFDDEDGTGEWNIRKCSAATLDVLAVSFGAELLEI
LLPHLRDKIFDAEWQQRESGVLALGAIAEGCIAGLEPHLPQLVPFLLRSLEDKKALVRSI
TCWSLGRYASWIVQVNPEDKTQYFIPTMEGLLRMVLDHNKRVQEAGCSAFATLEEEAGTE
MAPFLEPVLRNLTYAFSKYQQKNLLILYDAIGTLADSVGDALGQPGYLEILMPPLIDRWQ
RLGDNDPDLVPLLECLSSVSIAASQSFTTYTPPVYQRCLNIIHTTLQQYSAFEQDPDNVD
EPDRTFIVVALDLLSGLVQGMGEAIHPLILEGQPPLLHLLALCLTHYEPPVRQSAHALLG
DMAISCFPILKPVVPQILPSVIEQIVVEPPADCISVCNNAAWAVGEVALQFNNDSAALEP
FMPALVQRLIPILLSSKSPKSLSENAAVTIGRLGLVCPALVAPELPNFAQAWCTALWEIK
DNDEKDSAFRGLCMMISANPEGIQSSFVWFCNAICKWQHPSAQLDEMFRTILQGFKNGLG
AQWDAQMSNFPPVIRQRLAERYGV
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggcctggcagccgtcagaacaggggctccaagaggtccttggtatgctcagagatacc
tcgagcgtcgactcagaggtacagagaaatgtcgcccagcgtctcgaacaacttcgtttc
gtccccgacttccttgcatatcttgcccacgtcctcatccactgcacaggcgaacaagac
tctcatcgagcagtcgccggtcttttgctcaaaaactctctcaatcagcgttcaggaccc
acaacaaacgagaacgatgcccgagcaatggcctatgtcaagaatacagtcttgactggc
ttggcggaccccgatcagattgtgagacaaacagttggaacggtcatcatgtgcttgatc
tccaatgaggatgttggagcttggccagaagcgttggatgctttaacaaagggaatgggg
tcgacggaccctaacgtcgtcgagggctcctttaacacattacaaaaaatttgtgaagat
gcccctcataagctcgacttccaggtacaaggccgggacctcctcgaccatcttgttccc
cagtttatcgaattcaccaaccacaatgtgaacaaagtccgtctttacgctctccaaatc
ctccaatctctcctctccatcggtatcgccgctgtcaccgcgaacatcgataactatatc
cgtgctttgttcaacaaggcgtcagatccctcgcccgatatccggaaaagcgtctgtgcc
tctcttggcttgatccttggctctagaccggacaagttggtgccagaaatgggcaatgta
gtcgactatatcgtgttttgcactcaggacgatgacgagactgttgccctcgaagcctcc
gagttttggttgacttttgctgaggacgcttcactcaaggaccagctccgtccttatctt
cccaaggtcgccccacttttgctcaacaagatggtttattctgactacgacatcgctgta
cttgacatggacgaatatgatgaggatgttgccgacaaggagaccgatataaagccccgt
aactactcttccaaggtccatgccgcgcacgagagcaacgacccttcctcgtccaagggg
gctgggttttctcgtgaagctgctgatcgagcgtttgaggaggacgatgaggaagaggac
gaagaagatgacgatttctttgacgatgaagatgggacgggcgagtggaatattcgaaaa
tgttctgcggcgacgctggatgtgttggctgtatcttttggagcagagttgttagagatt
ttgttacctcatttgagagacaagatctttgacgccgaatggcaacaacgagagagtggt
gttttggcacttggtgctattgccgagggctgtatcgccggccttgagccccatcttccg
caacttgtccccttcctcctcaggtctctcgaagacaagaaggccctggtgcgatcgatc
acttgttggtctcttggtcgttacgccagctggatcgtccaagtcaaccccgaggacaag
actcaatatttcatcccgactatggaaggtctcctccgcatggtgcttgaccacaataaa
cgtgtacaggaagcgggatgttctgcctttgccactctcgaggaagaggccgggactgaa
atggcgcccttcttggagccggttttgcgaaacttgacatacgcgttctccaagtaccag
caaaagaacttattgatcttgtatgatgccatcggtacgcttgccgactctgtcggggat
gcgctcggccagccaggttatcttgaaatcctgatgcctcctctgatcgatcgatggcaa
agattaggagacaatgaccctgatttggttcctcttctcgagtgcttgtcctctgtgtca
attgctgcctctcaaagctttactacttatacaccccctgtctaccagcgatgcctcaac
atcatccacaccactcttcagcagtactctgccttcgagcaagatcctgacaatgtcgat
gagcccgacaggacttttatcgtcgtcgctctcgacttgttgtctggtttggtgcagggt
atgggagaagcgattcacccgttgatcttggagggccagccgccattgttgcacttgttg
gcgctctgcttgacacactacgaaccccccgtcagacaatccgctcacgctcttctcggt
gacatggccatctcgtgcttccccatcctcaaacccgttgtcccccagatccttccttct
gtcatcgagcaaattgtcgtcgagcctcctgctgactgcatcagtgtgtgcaacaatgcc
gcctgggctgtgggtgaagttgctcttcaattcaacaacgactctgctgcccttgagccg
tttatgcctgctttggtccagaggcttatccctattcttttgagctcaaaatcaccaaag
agtttgagcgagaatgcagctgtgacaatcggtcggttgggtcttgtttgccccgcgctt
gtggcccctgagctgcccaactttgctcaggcttggtgtacggctttgtgggagattaag
gataatgatgagaaggactcggcgttcagaggattgtgtatgatgatcagcgccaaccct
gagggtattcagagtagttttgtatggttctgtaacgccatctgcaaatggcaacatccc
tccgctcaactcgatgagatgttccgaacaattttgcaagggttcaagaatggtcttggt
gcgcaatgggacgcccaaatgtccaacttccctcccgtcatcagacagcgtctcgctgag
cgttacggcgtctaa
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