Cryptococcus deneoformans B-3501A: CNBE2430
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Entry
CNBE2430 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNBE2430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnb03041
]
CNBE2430
Enzymes [BR:
cnb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CNBE2430
Spliceosome [BR:
cnb03041
]
Complex C
Other components
Step II factors
CNBE2430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
Cas3-like_C_2
AAA_30
nSTAND3
ATPase
SLFN-g3_helicase
AAA_16
T2SSE
SRP54
ABC_tran
Motif
Other DBs
NCBI-GeneID:
4936253
NCBI-ProteinID:
XP_775529
LinkDB
All DBs
Position
5:631618..636735
Genome browser
AA seq
1302 aa
AA seq
DB search
MSARSPRGPATEDEFSHQIAIEMSRIMNQVNPNDLLGKRIVDIAKGNRTGDAFLRAVSTF
GQFPSEPMLSLHTRILAHLSVLQGQNQSGARRRSEHSPPRMLGGRPVGENVEGMDHDDTD
TLAPEPVRKGGLRRADNAPTFKAPATARPSLLGLDKLAAEKRAAAAATADRNGPPSKKAR
KDEGNEDDEQSGGVFKVPTIPIRRDNVRVRPEETPSRGSGLSEEARARLEARRRERNQPS
TGISASTADREHSREGLGDFQRRANRDRWNERGGEREPGQGEYSRDGRGGGNDWGRRQNG
RDGKPWNAAPTPRTSRADRDFDGGSARIPNRGWDETPRGSRGPGGWGKGERTSRGWDQTP
RSARESPEGGGLDLNAKEWEEEQVKLDRDWYSYDDEGAVAADDDHNPFSQWENLERAKEE
ELQAKAVKRQTARQAQFNADNDLWETNRMQTSGVLQRGGVDDDFDDDSDSKVHVLVHDLK
PPFLDGTVAYTKQLDPINPVKDGTSDMALFSKKGSALVRERRERQEREKAAAKAASIAGT
TLGNLMGVTDEPDLGQEGQKDGVTENYKADSQFSSHLKKSEGVSNFAKSRTLKEQREYLP
AFAVREELMGMIRDHQVLVVVGETGSGKTTQLGQFLYEDGYCANGMIGCTQPRRVAAMSV
AKRVSEEMECTLGETVGYAIRFEDCTSKDTKIKFMTDGVLLRESLNEGDLDRYSVIILDE
AHERSLSTDILMGLLRKILTRRRDLKLIVTSATMNAEKFSQFFGNAATYTIPGRTFPVEI
FHSKSPCEDYVDSAIKQVLQIHLSSSQGDILVFMTGQEDIECCCQVIEERLSQLDDPPPL
AVLPIYSQMPADLQAKIFQPTPDGRRKVVVATNIAETSLTVDGILYVVDCGYSKLKVYNP
KVGMDALQITPISQANCGQRAGRAGRTGPGFCYRLYTETAYLNELFASNIPEIQRTNLAN
TVLLLKSLGVKNLLEFDFMDPPPQENILNSMYQLWVLGALDNVGNLTSIGRKMSDFPMEP
SLAKMLIVSVDYQCSSEMLTIVSMLSVPSVFYRPPQRAEESDAAREKFFVPESDHLTLLH
VYTQWKSNGYSDSWCMKHFLHPKLMRKAREVRGQLEDIMKQQKMDLLSVGTDWDIVRKCI
TAGYFHQAARVKGIGEYMNIRTGLPCVLHPTSALYGLGYMPDYVVYHELVLTSKQYMMCV
TSVDPYWLADLGSVFFSIREKNFDALARARANRDFSKKTEMEAEMARQREEMERAKAEKI
KKEAVAKTPRIGGVGVAYTPKSAGIGAGARSSATPRRRAGGI
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccaggtcaccaagaggtccagcaaccgaagatgaattttcacaccaaattgct
atcgagatgtcccgaatcatgaaccaggtcaacccaaatgacctccttggtaaacgaata
gtggatatcgcaaaaggcaaccgtactggcgatgcatttcttagagctgtttcgacattc
ggccagtttcctagtgaacctatgctatctcttcacactcgtattctcgcccacctttca
gttctccagggccaaaaccagtcaggcgctcgtagacgatctgagcattccccacctagg
atgcttggtggtcgacccgttggagaaaatgtggagggcatggatcacgacgacaccgat
acattagcgcccgagcctgtaaggaaaggtggcttaagaagagctgataacgcaccgaca
tttaaggctcccgctacagctcgaccgtcactactgggactggacaagttagccgctgag
aaacgtgcagcagcggccgccactgcagacagaaatggtccgccgtccaaaaaggctcga
aaagatgaaggaaatgaagatgacgaacaatcaggcggtgtcttcaaagtgcccaccatt
ccgattcgaagggataatgtccgggtgcgacccgaggaaacacccagtcgaggatctggc
ctgtcagaagaggctcgcgctcggctcgaagctcgtcgtagggaacgcaaccaacctagt
acgggcattagcgcgagcactgccgatcgcgagcattcaagggagggcctaggggatttc
cagaggagggcgaacagagatagatggaatgaacgaggtggggagagagagccaggacag
ggagaatacagtagagatggacggggaggcgggaatgactggggcagaagacaaaatggt
cgagacggcaaaccgtggaatgcagcaccgacacctcgcacctctcgtgcagacagagat
tttgatggtggtagtgcccgtatccccaatcggggctgggacgaaactccacgcggatca
cgcggtccaggcggatggggcaaaggggaacgcacatccagaggttgggaccagactccg
agatcggctagagaatcaccggaagggggcgggttggatctcaacgctaaagaatgggaa
gaagagcaagtcaagctggatcgagactggtatagttacgatgatgaaggggcagtggcc
gcagatgacgatcataatccgttctcacaatgggagaatttggaaagagcaaaagaggaa
gaactgcaagctaaggctgtcaaacgtcagactgcccgtcaagctcaatttaatgcggat
aacgacctttgggaaactaaccgaatgcaaacatccggtgttctccaaagaggaggcgtt
gacgacgactttgacgatgactctgattccaaagttcatgttttagtgcatgacctcaaa
cctccctttctggatggtactgtggcatatacaaagcaacttgaccccattaatcctgtt
aaggatggcacaagtgacatggctctcttctctaagaaaggaagcgctttggtaagggag
agaagggaaaggcaggagagggagaaggctgcggcaaaagcagcgtcgatcgcaggtacc
acccttggtaacctcatgggtgtcacggacgaaccagatctcggtcaagagggtcagaaa
gatggcgtgactgagaattacaaagctgattcacaattttcgagtcatctcaagaaatcg
gaaggtgtctccaactttgcaaagagtcgtactttgaaagagcagcgagaatatttgccg
gcctttgcggtacgagaagagttaatgggaatgatacgagatcaccaagtgcttgttgtc
gttggagagaccgggtcaggcaaaacaactcagctgggacagtttttgtatgaggacggg
tattgcgcgaacggaatgattgggtgcacccaaccacgtcgtgtagctgccatgtctgtg
gccaagcgtgtcagcgaagaaatggagtgtaccctaggtgaaaccgttggctacgctatc
cgtttcgaagactgtacatccaaagatacaaagattaagttcatgacagatggtgtcttg
cttcgagagtcattgaatgaaggcgatttggatcgatatagtgtcatcatccttgatgaa
gcacacgaacgatcattgagtacagatatcctgatgggtcttttgcgaaaaattcttacc
cgccgacgtgatctgaaactcatcgttacctcagctaccatgaatgccgaaaagttctct
caattttttggtaacgctgccacttacactatccctggtcgtaccttccccgttgagatc
ttccattccaagtcaccttgcgaagattacgttgatagcgccattaagcaagtcctccaa
atccacctgtcaagttcgcagggagatattttggttttcatgacaggtcaagaggatatt
gaatgttgctgccaagtcattgaagaacgactgtctcaacttgatgatcccccgcctttg
gctgtgttaccaatctactctcaaatgccagcggacttgcaagcgaagatctttcagcca
accccagatggtcgacgcaaggtcgttgttgctaccaacatcgcggagacttcccttaca
gttgacggcatcctatatgttgtcgactgcggatactcgaagctcaaggtatacaatccc
aaggttggaatggatgctttgcaaatcacgcctattagtcaagccaactgtggccaacgt
gctggtcgtgctggtcgtacaggtcctggtttttgttaccggttgtatactgagacggca
tatctcaacgagctatttgctagcaacatccctgaaatccagaggaccaacttggcaaac
accgttctacttctcaagtcgttgggtgtcaaaaatttactggagtttgattttatggat
cctcctcctcaggaaaacatccttaactcaatgtaccagctctgggtactgggcgcttta
gataatgtgggcaacttgacctctatcggtcgcaaaatgtccgatttcccaatggaacca
tccctcgccaagatgctcattgtctccgttgactatcaatgttcctctgagatgctcacc
atcgtgtcaatgttatctgtgccatcagtgttttacagacctcctcaaagagcagaagag
agcgacgccgccagggaaaaattctttgtgcctgaaagcgaccatctgacgctgttacac
gtttatacccagtggaagagcaatggatatagcgattcttggtgcatgaaacatttcttg
cacccgaaactcatgagaaaggcccgagaagtgcgaggacagttggaagacattatgaaa
cagcaaaaaatggaccttttgtcagtaggaacggattgggatatcgtcagaaaatgtatt
actgctggttacttccatcaggcggcgagagtcaaaggcattggggagtatatgaacatt
cgaacaggactgccttgtgttcttcacccaacttctgcattgtatggtcttggttatatg
cctgactatgttgtgtatcatgagcttgtattaacatccaaacaatacatgatgtgtgtt
acctcggttgatccctattggcttgccgacctcggtagtgtcttcttttcaattagagag
aaaaactttgatgctttggctcgcgcacgagcaaacagagacttcagcaagaaaacagag
atggaagctgagatggccagacagcgagaggagatggaacgagcgaaagctgagaagatc
aagaaggaagcagtggcaaagactcccagaattggcggtgttggagtagcatatacgccg
aaaagtgcaggtattggtgcgggtgcgaggtcatctgcaacaccgagaagacgagcagga
ggcatttaa
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integrated database retrieval system
