Cryptococcus deneoformans B-3501A: CNBE3710 Help Entry CNBE3710          CDS       T01040                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism cnb  Cryptococcus deneoformans B-3501A Pathway cnb03020   RNA polymerase cnb03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:cnb00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     CNBE3710   09124 Replication and repair    03420 Nucleotide excision repair     CNBE3710  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cnb03021]     CNBE3710    03400 DNA repair and recombination proteins [BR:cnb03400]     CNBE3710 Enzymes [BR:cnb01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      CNBE3710 Transcription machinery [BR:cnb03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      CNBE3710 DNA repair and recombination proteins [BR:cnb03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       CNBE3710 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_3 RNA_pol_Rpb1_7 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R AcetDehyd-dimer Motif Other DBs NCBI-GeneID:  4936382 NCBI-ProteinID:  XP_775097 LinkDB All DBs Position 5:1007345..1013410 Genome browser AA seq 1786 aa AA seqDB search MTVTFPYSSAPVKQVKEIQFGIMSPEEIKAFSVAKIESTEVLDENGKQKVGGLMDPKMGT IDRNFKCQTCLEGMSECPGHFGHIELARPVFHQGFIVKVKKILECVCYSCGKLKVDMRDP MVANAVRRIKAQHRLKAIWALAKDKKHCEPDELDEKDNGDATFEDEYLQEQKAAMKGHGG CGHEQPVWRKKGLKLMGVWKPTDKGEDEAAEPEERNISPGEVYNILKKITPEDLHIMGLN ADYARPDWMILTVLPVPPAAVRPSIAVDGGAMRSEDDLTYKLSQIIKFNGVVRRMEAEGV PPSVVNEQFDLLQYHVCTYMDNDIAGLPRDQQKGGRAIKAIRARLKGKEGRMRGNLMGKR VDFSARTVITGDPNLQLDQVGVPKSIAMTLTYPERVTPYNIVYLQTLVNNGPATYPGARY YVKDTGERVDLKYRKSGEPISLQFGWIVERHLKDGDYVLFNRQPSLHKMSMMSHRVKLMN YSTFRLNLSVTSPYNADFDGDEMNLHVPQSEETRAELSQIAWVPRQIVSPQANKPVMGIV QDTLCGIRKFTLRDNFLDWLQVQHILLWLPEWDGTIPPPAIFKPKPMWTGKQLLSMTIPK GINITYKNNEKPSPIDVTDENVLIENGELVHGTIVKNMAGSANNGLVHVIFRELGHIAAR DFFSAVQRVVNYWLLHFGFSVGIGDTIVDKATMAGITNRMVEAKEAVQKLIQEAEANRMK PKPGMTIRETLEASIAAELNKARDWTGKTTQDNLKADNNVKQMVVSGAKGSFINISQMSG VVGQQFVEGKRISFGFRHRSLPHFSRDDYGPESRGFVENSYLRGLTPQEFWFHAMGGREG LIDTAVKTAETGYIQRRLVKAMEDLKVAYDGTVRNSVNEVVQFLYGEDGMDGAAMEKQSL DIIRLSDQAFERRYKIDVLGGSGFSKGILQAGIDQSSISLQKLLDEEFAQISEDRRILRS EIYPDGTPGHPLPVNIQRVIQNSQQIFHIDPRVPSDLDPVYLLEQRDALADRLLVVRGDD KLSRAAQKNATLVFNMLLRSHLATRRVLEEYHLNREAFDWVIGEVEQIFNKAVVNAAEMV GTLAAQSIGEPATQMTLNTFHYAGVASKSVTGGVPRLKEIINVAVNIRTPALNVYLEPEY SKTEEDAHQIMRKLTYTRLRDITATVEIFYDPKLDSTDIEEDKDFVDAFFAIPDEDIRLE LHSPWLLRLELDRAKVLEGGYEMSQIVDAIAETVGKDVFVIHSEDNAPKLVIRIRVVAEK EDEELLGDEDMFLKRIEGTLLDQVELGGITGITRVFISEGKQVVVSQNGEYDQEKEWFLE TDGINLKEVMAVDGVNAFRTYSNNCYEVYETLGIEAARNALYKELNGVIEMGGSYVNYRH LALLCDLMCSKGALMSITRHGINRTDAGALSRAAFEETVEILLEAAAVGDVDDCKGVAEN VLLGQMAPMGTGAFDVSLDMNMLKDVIVDHRLPVQNMMAGGMAGGMTPGGAMTPYDNLSP MWGGDKGALGHAAFSPIQSSANDEGGNFAYMGYGQSPMHGGMSPAGYSPSSPAGYSPTSP FAVTSPAYSPTSPFAGAAAGAASPWVGRGGYGATSPAYSPTSPQYSPTSPQFSPTSPSFS PSSPTYSPASPAYGGAGAGNRASPYSPTSPAYSPTSPMGGITSPQYSPTSPRYSPTSPAF SPTSPSYSPTSPAPFQATSPRYSPTSPQFSPTSPTYSPASPAYSPTSPQYSPTSPAYSPT SPAYSPTSPAYGGAAPNGGTAQQQNGQARPGWGNTGGYGTSPSWKS NT seq 5361 nt NT seq  +upstreamnt  +downstreamnt atgacggtcacatttccttactcctctgcgcctgtcaaacaggtcaaggagatccagttt ggtataatgagcccagaggagatcaaagccttttctgtcgccaaaatcgaatccaccgag gtcttggatgagaatgggaagcaaaaagttggaggtctgatggatcccaagatgggcacc atcgacaggaattttaaatgtcaaacatgtctcgaaggcatgtccgaatgtccaggtcac tttggtcatatcgaacttgctagaccggtttttcatcaaggtttcattgtcaaggtgaag aagatcttggagtgtgtttgttatagctgtggaaagctcaaggtcgacatgcgagatccg atggtagcgaatgcggttcgacgtatcaaggctcaacaccgactcaaagccatttgggcc ctcgccaaggacaagaagcactgtgaacctgatgagctagatgaaaaggacaacggcgat gccacatttgaggacgaatatctgcaggaacaaaaggcggcaatgaagggtcacggtggt tgtggtcacgaacaacccgtatggagaaagaagggattaaaattaatgggtgtctggaag cctaccgacaagggagaggatgaggctgccgagccagaggaacgcaatatttctccaggg gaagtttacaatatccttaaaaagatcactcccgaggacctgcacatcatgggtctcaat gccgactatgcccgtcccgattggatgatccttactgttcttcctgtacctcccgcagct gtccgaccttcgatcgctgtcgacggtggtgccatgcgcagtgaagatgatttgacctac aagctttcacagatcatcaagttcaacggtgtcgtacgtcgaatggaggcggaaggtgta ccacctagtgtcgtgaacgaacagttcgacttgcttcagtaccatgtatgtacatacatg gacaacgacattgccggattgcctagagatcaacagaagggaggtagggccatcaaggct atcagggcgaggttaaaaggaaaagaaggtcgtatgagaggtaatctgatgggaaagcgt gtcgacttttcagcgcgaacagttattaccggagaccccaacttgcaattggatcaggtc ggtgtgcccaagagtatcgccatgactttgacatacccagagcgagttactccatacaac attgtctatcttcaaacgcttgtcaacaatggtcccgccacctatcctggtgctcgatac tacgtcaaagacactggagaacgagtcgatttgaagtaccgcaagtcaggtgaaccgatc agtttgcagtttggttggattgtggaaagacatttgaaggatggagattatgtcttgttt aaccgacaaccgagtttgcataaaatgtccatgatgtcccatcgagtcaaattgatgaat tattcaactttccgtttgaacctttcagttacttcgccttataatgctgatttcgacggt gatgaaatgaacttgcacgttccgcagagtgaagaaactagagcagagttgagtcagatt gcttgggttcccagacagattgtctcgccccaagcgaacaagcctgttatgggcattgtc caggacactctgtgtggtattcgtaaattcactctccgagacaatttcctcgattggctt caagtccagcacattcttctttggcttccagaatgggacggaaccatccccccacccgcc atttttaagcctaaacccatgtggaccggtaaacagcttttatcgatgaccattcctaag ggaatcaacatcacctacaaaaacaacgaaaagccttcgcctatcgacgtgacggatgag aatgtgttaatcgagaatggagagttggtgcacggaacgattgtcaagaacatggcgggt agcgccaacaacggtttggtgcacgtcatcttccgagaattgggccacatcgcggctcga gatttcttttcagcggttcagagagttgtcaactattggttattacacttcggtttctcc gtcggtatcggtgacacgattgtcgataaggcaactatggcgggtatcaccaatcgaatg gtggaggccaaggaggctgtccaaaaattgatccaagaagctgaagcgaaccgaatgaag cccaagcccggtatgacaatccgagaaaccctcgaagcgtctatcgccgcagagctcaac aaggctcgtgattggactggtaagacgactcaggataacctcaaagcggacaacaatgtc aagcaaatggtggtgtcgggtgccaagggttcgttcattaacatttcccaaatgagtggt gttgtgggtcagcagtttgttgaaggaaaacgtatctcgttcgggttccgacaccgctca ttaccacacttctcaagggacgattatggacccgagtctcgaggtttcgttgaaaactcg tatttgcgtggtttgactcctcaagaattttggttccacgctatgggtggccgagaaggt ttgattgataccgctgtcaagactgccgagactggttatatccaaagaagattggtcaaa gcgatggaggacttgaaggttgcttatgacggtactgtgagaaatagtgtgaatgaggtc gtgcagttcttgtatggtgaagacggtatggacggtgctgcgatggagaagcagagtctg gatattatccgactctctgatcaagcatttgagaggcgatacaagattgatgttcttgga ggaagtggcttctccaaggggatccttcaagccggtatcgaccaatcatccatctctctc caaaagctccttgatgaagagtttgctcaaatctcggaggaccgtcgtatccttcgttcc gaaatctacccggacggtacccccggtcatcccttacctgtcaacatccaacgtgtcatc caaaattctcagcaaattttccacatcgaccctcgtgttccctccgatctggatcccgtt tacttgctcgaacaaagagatgcgttggctgatagactgcttgtggtgcgaggtgacgac aagctttcaagggctgcccaaaaaaatgctactcttgtgttcaacatgcttttgcgatcc catcttgctactcgtcgagttctggaagagtaccaccttaacagggaggctttcgattgg gtcattggagaagtggaacaaatcttcaacaaggctgttgtcaatgctgccgagatggtt ggtactcttgctgctcagtctattggtgaacctgccactcagatgacactcaacacgttc cattatgcgggtgtggcgagtaagtctgttactggtggtgttccccgtctgaaggaaatt atcaacgtcgctgtcaacattcgaactcctgctttaaacgtctatcttgaacccgagtac agcaagaccgaagaggatgcgcaccagatcatgcggaaattgacatacactcgattgagg gatattactgccactgttgaaatcttctacgaccccaagcttgactctacggatattgaa gaagacaaggactttgtggacgcgttctttgcgatccccgatgaagacatcagactggag ctccattccccttggctattgcgtcttgagcttgaccgagccaaggtgcttgaaggtggt tatgaaatgtcgcagatcgttgatgccattgccgagaccgtgggcaaagacgtctttgtt attcactctgaagacaatgctcccaagcttgttattcgtattcgagtcgttgctgagaag gaggatgaagaactgttgggtgacgaggacatgttcctgaagaggattgaaggcaccttg cttgatcaggttgagcttggtggtatcactggtattactcgagttttcatctcggaaggc aagcaggttgttgtctcccagaacggtgaatacgatcaggagaaggaatggttcctcgaa acggacggtatcaacctgaaggaggttatggctgtcgacggtgtcaatgctttcagaacc tactccaacaactgttacgaagtctacgagactcttggtatcgaagctgcccgaaacgct ctctacaaagagctcaacggtgttattgagatgggtggttcttacgtcaactaccgacac cttgcgctgttgtgtgacctcatgtgtagcaagggcgctttgatgagcatcactcgacac ggtatcaaccgaaccgatgctggtgctctttcaagagcggcgttcgaagagacagtggag atcttgcttgaagctgcggctgtgggtgatgtggatgactgtaagggtgttgcggagaat gtgttgttgggtcagatggctcctatgggtactggtgcttttgatgtttcacttgacatg aatatgctcaaggatgtcattgttgaccaccgattgccggtgcaaaacatgatggctggg ggcatggctggtggaatgactccaggaggtgcgatgactccttacgacaacctgtcgccc atgtggggtggagacaagggagctttgggtcacgcggcattctcgcctatccaaagttca gcgaacgacgaaggtggcaactttgcttacatgggctatggtcagtcaccgatgcacggc ggtatgtctcctgcaggttactcaccttcatcgcctgctggatactcgcccacttcacca ttcgctgttacaagcccggcctacagccctacatctccgtttgcgggtgcggcagccggc gcagcatccccttgggttggacgaggcgggtacggcgctaccagtcctgcttactctccg acatctcctcaatattctcccacttctccccagttctctcctacatcaccatccttctct ccatcttcacccacttactcgccggcttctccagcttatggcggtgcgggtgctggaaac agggcgtcaccttattctcccacatctccagcttacagcccgacaagcccaatgggtggt atcacatctccgcaatacagtcctacgagccccaggtacagtccgacaagtccggcgttt tcacctacaagtccgtcatacagtccaacaagccctgcgcccttccaggctaccagtccg aggtattctcccaccagtcctcaattctctcccacttcgcctacctactctcctgccagt ccagcttactcgcctacaagcccccaatattcacctactagtcctgcctacagtccgacg tcgccggcttacagcccgacatctccagcgtacggcggtgctgcccccaacggcggtaca gctcaacagcaaaacggtcaggcgagacctggatggggaaataccggagggtacggtaca tcgcctagctggaagagctaa

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