Cryptococcus deneoformans B-3501A: CNBE4010
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Entry
CNBE4010 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CNBE4010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnb03021
]
CNBE4010
03036 Chromosome and associated proteins [BR:
cnb03036
]
CNBE4010
Transcription machinery [BR:
cnb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CNBE4010
Chromosome and associated proteins [BR:
cnb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CNBE4010
PBAF complex
CNBE4010
GBAF(ncBAF) complex
CNBE4010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Trypan_PARP
SANT_DAMP1_like
DUF7573
Motif
Other DBs
NCBI-GeneID:
4936412
NCBI-ProteinID:
XP_775127
LinkDB
All DBs
Position
5:complement(1086182..1088362)
Genome browser
AA seq
684 aa
AA seq
DB search
MSTPKISLRISTPADADSQQEQQAEATGQGVQTHDVASAPGKEKEREPHYGGEIANISVP
VDNGEPSATPRDAAATETPAEETPAPEPERPTPAQLHDLATTYLAAQTHPLVIPSYSSWF
SLTTIHPIERRSLPEFFSSRNRSKTPSVYKDYRDFMINTYRLNPGEYLTVTACRRNLAGD
VGAIMRVHAFLEQWGLINYQVDPDTRPAALGPPFTGHFRVTLDTPRGLSNLLHPGVKPGA
GALSQTNGVTPHPSNLDLRKTIYHSTPRTTKPVSAEDATKLASTNGDVPKSKTYVCETCG
TDCTTTRYHSLKDGEYTICPSCFVSGRFPSTMYSGDFVRLDEEAFKHASASVGADWSDQE
TLLLLEGIEMFDDDWQAVADHVGSRSKESCISKFLQLPIEDPYLTQEPAADLGPLRYQAG
MNGLPFEGGENPVMSVVAFLASQVGPAVAAAAAQSALGELAKGLKRKRSEGEKEGEKEGK
VAKNDEEKKESDEKKKESDEEKEKEKEGEAEPMAVDEATEQPTEPSTAPVENTETEANPS
VPSASDLSRAATLALSSAATKASALASHEDHRISQLVSRLVTVQTRKVELKLSMFERLEE
LLENEKRSIELARQNLFRDKQTVKKQLAQVEELLKKAKEGDKGVEGEVAGLKKDIETGST
AEAVKEVQATNEPAVEGDTTLGKL
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccaagatatccctccgcatatccacgcccgcagacgcagacagccagcag
gagcagcaagcagaggccacaggccagggcgtgcagacccacgacgtcgccagcgcgccg
gggaaggaaaaggagcgagaaccgcattacggcggggagattgccaacatcagtgtgccg
gtcgataatggggaaccgtcggccactcctcgcgacgccgccgcgacagagacacccgca
gaggagacaccagcaccggaacccgaacggccaacgccagcccagctgcacgacctcgca
accacctatctcgctgcccagacccacccgctcgtcatcccttcttattcttcatggttc
tccctcaccactatccacccgatcgagcgtcgttccttgcccgagttcttctcttcaagg
aacaggagcaagacgccgagcgtgtacaaggactatagagatttcatgattaacacatac
aggctgaaccctggagaatacttgacggtgacggcgtgcaggaggaatttggccggtgac
gttggcgcgatcatgagggtgcatgcctttttggaacagtggggattgattaattatcag
gtcgaccccgacactcgaccggcggcccttggtcccccttttactggccacttccgggtc
actctcgacacccctcgtggcctgtccaacctcttgcatcccggtgtcaagcccggtgcc
ggcgccttatcgcagaccaatggcgtcactcctcatccgtccaacctcgacctccgcaaa
accatctatcactccacccctcgcactaccaagcccgtttctgccgaagacgcgacaaaa
ctcgccagcaccaatggcgacgtgcccaaatccaagacttatgtgtgtgagacttgcggt
accgattgcacaacgacaagatatcactcgctgaaggatggcgagtacaccatttgtccg
tcatgttttgttagtggacggttcccttccaccatgtactctggcgactttgtccgtctc
gacgaagaagcattcaagcacgcttcagcttctgtcggcgccgactggtcagaccaggaa
acattgttgcttcttgaaggtatcgaaatgtttgatgacgactggcaggctgttgccgac
catgttgggagtcgttccaaagaatcttgcatctccaaattccttcagttaccgatcgaa
gacccgtatctcactcaagaaccggctgccgatcttgggccgttgagatatcaggctggt
atgaatggattaccgttcgaaggcggagagaacccggtgatgagcgtagtcgcgttcttg
gccagccaagttgggcctgctgtagcagcggctgcagcgcagagcgctttgggagaactg
gccaagggattgaagaggaagagaagtgaaggagaaaaggaaggggagaaagagggcaag
gttgcaaagaatgacgaggagaagaaagaaagtgacgagaagaagaaggagagtgacgag
gaaaaggaaaaagaaaaggaaggcgaggctgagcctatggctgttgacgaggccacagaa
caaccaacagagccttcaacagctccagttgaaaatactgagactgaagccaacccctcc
gttccctctgcatctgacctttctcgcgccgccactcttgccctttcctctgctgccaca
aaagcatccgctctcgcttcccacgaggatcatcgtatctcccaactcgtctcccgtctc
gtcactgtccaaactcgtaaagtcgagctcaagctatccatgtttgaacgtcttgaagaa
ttgcttgaaaacgaaaagagatcgatcgagttggcgaggcaaaacttgtttagggataag
caaacggtcaagaaacagttggcgcaggtggaagaattgttgaaaaaggcgaaagaggga
gacaagggggtcgaaggggaagttgccggtttgaagaaggacattgagactggaagcaca
gcggaagcggtcaaagaagtgcaggcgactaatgagccggcagtagaaggtgatacaacg
ttgggcaagctctag
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integrated database retrieval system