Cryptococcus deneoformans B-3501A: CNBE4720
Help
Entry
CNBE4720 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
cnb
Cryptococcus deneoformans B-3501A
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnb03021
]
CNBE4720
Transcription machinery [BR:
cnb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
CNBE4720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
HEAT_2
ResIII
TPR_TTI1_C
mTOR_dom
DUF2663
PPP2R1A-like_HEAT
Motif
Other DBs
NCBI-GeneID:
4936484
NCBI-ProteinID:
XP_775199
LinkDB
All DBs
Position
5:1266969..1273118
Genome browser
AA seq
1848 aa
AA seq
DB search
MSFRQDKLILLLDSGSSQQIRQTAAKQIARIARTSFDAATSKPDAKPHVDGDSSITVHSS
GAEQDAWNDTLETISKILALFKSKSSETRHAAAHAIGLLAKSMPEYIEIASMSRAFLTSQ
PTDLPSTLKHGQMLLASAGREYAAKPLPGDKAKRRKAMMASVGLGDAVGWGEDTDKVLDD
DDDDMEDVRKTAPPSREPSVPPPDVFEGLSARQITMLKRKKGTNIMEEANKMRRLNEKAV
GNGSSSAAPSRANSPPLPESSATPDLKAEVITIDPGAKVRAAEAGGQIDPALDTEGNPLA
SSKTLTITSGQSPWTTVLLEVIPDLHDTTWQTRHGSALVIMEILRSLGTSYANAHPELYV
ALSRQLLSLLVLDRFGDFVGDTVIAPVRETAAQTLGVVLKYISTPGVKEIHQTLMGMVRQ
PWAKRGKEAENSQKADKFAWEVRHAGLLGLKYEVAVRGDLLSTKMEEDVKPDVEMGDFNL
LDDVVNAAILALGDADDDVRTVAASALTPIAETLASQLPTEELAKLLQSLWDCLAEGGDE
LGSSTGAVMDLLGALISYSEVIALLSADNNNLVSRVYAFLRHPIASVRLSVANILLAFSR
LSSIPRRWSSDGYFSFLFQNLVLEERQDVRDVSFQAFETSLVEASDMPEGVGVVLGGDVE
DWYSIIMTPIGVALDANLFRRPTKATGQTHNVDKAMMAGDMSLISMDTALQTRIAGAKAL
ALLRRYKLTEINDIKLLRQFLGSASSHQTFLASVIIQEWALDTESRVSDPFSFSLGTSNP
DVESLSTLLIDRIGSPAPSTYHEMAMVLQRIYSECSALLTAFSVEGKLSKDKVPSLPKRI
DPLSNTPDVFSIESAHHAVTTQFDILAGKLSKNAIKNALPSLQDRRNKVMGSVGYFSIMK
EKYDVQVMAGIAGALVALKIMPPKFGPVIKNLMDGVKKEENEILQKRDAFWVAAFIQYTT
SPFFTGRINPSDKVVKNLFTFLCLDTSVTPVFSPTAQGATEGIITLLEERTAAAAANARK
KDIVEESEEQMASRMTRRGALETFKAMAKRFGSNLFEKVPKFWEGVSGALLANFADGVNM
EQVDQNLTANVQAGQDLIDALTSLRLIAPELDPVLYYKLHDLFSPTITALQSSFSVVRNA
AAQCLAAMCDVMTDEGMKRVVDDVVPLVGDAKKAYSRQGAVEAIHRIIKVLDLKALPYVL
FLIVPILGRMSDPDEHVRLLSTSTFASLVKMVPLEAGIPDPPGFSADLLAKRDEERKFLM
QLLDGSKAEQYQIPVEIKAELRQYQKDGVSWLAFLAKYQLHGILCDDMGLGKSLQSICII
ASKHHERAERHKATQSIDSAHLPSLIVCPPTLTGHWYHEILKFAPHLRAVQYVGSTFERA
TLRRSLSSYDVVISSYECVRSDISELSKFSFLYCVLDEGHIIKNTKTKLAVAVKQIKAQH
RLLLSGTPIQNNVLELWSLFDFLMPGFLGNERTFNEKFSKPILADREGKATPKEREAAAN
ALEALHKQVLPFLLRRLKEDVLNDLPPKIIQDYYCELSPVQQQLYEEFSRSKAAEEAGME
IETSASKEGQGHVFQSLQYLRKLCNHPALVLDGEPQRFKEIQKKIGGGPELHDLSHAPKM
EALKQLLQDCGIGLPVDKLADDVTTHRVLIFCQLRPMLDIIEKDLFGTHMPTVSYMRLDG
STDPRKRHAIVQTFNADPRIDVLLLTTSVGGLGLNLTGADTVIFVDHDWNPMKDLQAMDR
AHRLGQRKVVNVYRLITRGTLEEKIMGLQRFKLNIASSVVTQQNAGLGSMNTGEVLDLFK
VSAEGEPVKTKSAGTGAVSMSKMLEELDELPPEDEYAELSLSNFLSKV
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttagacaagataaactcatccttcttctcgacagtggatcttcacagcaaata
aggcaaactgcagcgaagcagattgctcgtatagctcgtacttctttcgatgccgccaca
tcaaaacctgatgcgaaacctcacgtcgatggtgatagttctataacagtccatagcagc
ggtgcggagcaagatgcgtggaacgatactctagagactatcagtaaaatactcgcgctt
ttcaagtcaaagtcatcagaaacacgacatgctgcggctcatgccattgggttactcgct
aaaagcatgcccgagtacatcgagatagcttcgatgagccgggcatttcttacttcacaa
ccgacagatctgccatctaccctcaagcatggccagatgctattggcgtccgcgggtaga
gagtacgctgctaaaccgttaccgggagacaaagccaaacgccggaaagctatgatggca
tctgttggcctaggtgatgctgtcggatggggtgaagataccgataaggtacttgatgat
gacgacgatgatatggaggatgtgaggaagactgcgcccccgagtagagagccctcggtg
cccccaccagatgttttcgaggggctgagtgcgaggcagataacgatgcttaagcggaag
aagggcaccaacattatggaggaagccaacaagatgcgtcggctcaacgaaaaagctgtc
ggcaatggaagttcctcagcggcgccttctcgtgccaattctcctccccttcccgaatca
tcagcgacacctgatttgaaggccgaggtcatcacgatcgatcccggagcaaaagtcaga
gcagctgaagctggcggacaaatagatcctgctctcgataccgagggcaacccattggca
tcttccaaaactcttacaatcacttctggacaatccccatggactaccgttcttcttgaa
gtcattcctgacctacacgatacgacttggcagactcgtcatggctctgcattggtcatt
atggagatactccgttctcttggtacatcttacgctaatgcccatccagagctctacgtc
gccttatcccgtcagctactctcgctccttgttttggaccgtttcggtgactttgtgggc
gacactgtcattgctccagtacgtgaaactgcagctcagacactaggtgtcgtgctcaag
tacatttcaacccccggtgtcaaggaaatccaccagactcttatgggcatggtgagacaa
ccttgggccaagagagggaaggaggccgagaactcacaaaaggccgataaattcgcttgg
gaggtcagacatgccggattgttaggcttgaagtatgaagtggctgtgagaggagacttg
ttgtcgactaaaatggaagaggatgtcaagcccgacgtagagatgggggatttcaacctt
ttggatgatgtagtcaacgcggctatcttggcattgggagacgccgatgatgatgtgcga
acggttgctgcttccgccttaacacccattgcagagacccttgccagtcagttgcctact
gaagagttggccaagcttttgcagtcgctatgggattgtctagctgagggtggggatgag
cttggtagcagtacaggtgcagtcatggaccttctgggtgcccttatctcctactctgag
gtaatcgccctcctttctgccgacaacaacaacctagtctctcgtgtctacgccttcctt
cgtcatcctatcgcttccgtgcgtttatcggttgccaacattcttcttgctttttcacgc
ctttcttcaataccgcgacggtggtcttctgacggttacttctcatttttgttccagaat
cttgttttggaagaacgccaggacgtgagagatgtttctttccaagctttcgagacgtct
ctcgtcgaggcttccgacatgcctgagggcgttggtgttgtcctcggaggcgatgttgaa
gactggtactccatcatcatgactcccattggcgttgctctggatgccaatctcttcaga
aggccgacaaaagcaactgggcagacacacaatgtggacaaggcgatgatggcgggagat
atgtcacttatctcgatggatacggcattgcagacgagaatagctggcgcgaaagcttta
gcgctgttgagacgatacaagttgacagaaatcaacgacataaagctcttgcggcaattt
cttggttcagcaagttcccatcagacattcttggcttcagttatcattcaggaatgggct
cttgatactgaatctcgagtatccgatccattctcgtttagtctcggcacttccaacccg
gacgtcgagtccttatcaacgcttctcatcgaccgtatcggaagtcctgccccttcgacg
taccacgagatggcaatggtcctgcaaagaatctactccgaatgcagcgctttgctcact
gcgttcagtgtagaaggcaagctttctaaggacaaggttccctccttgcccaagcgtatt
gatcctctcagcaacactccagatgtcttctccattgagtctgctcaccacgctgtcact
acccagttcgacatcttagcaggcaagctatccaagaacgccattaaaaacgcattgccc
tctcttcaagataggagaaataaggtgatgggttctgtcggatacttctccatcatgaag
gagaagtacgacgtacaagtcatggcaggtattgcaggtgcgttggtggcacttaagata
atgccacccaaatttggaccagttattaagaacttgatggacggcgtgaagaaggaagaa
aatgagatccttcagaagagggatgccttctgggtagccgctttcatccaatatacaaca
tcacccttctttactggtcgaattaatccctccgacaaggttgtcaaaaatctctttacc
ttcctttgcctcgacacttctgtcactccggtgttctcaccgaccgctcaaggcgccacg
gaaggcattatcacacttctcgaggagagaacagcggcagcagctgctaatgctaggaag
aaggacatcgtggaagagagtgaggagcagatggcgagtcgcatgaccagaaggggtgct
ttggagacatttaaggccatggcgaagaggtttggctcgaacttgtttgagaaggtccct
aaattttgggagggtgttagcggtgcgctattggccaacttcgccgatggggtgaacatg
gaacaagttgaccaaaatttgacagccaacgttcaagccggtcaggatttgattgacgct
ctgacttctctccgtttaatcgctcctgagcttgaccctgttctttactacaaactgcac
gaccttttctcacccacaatcactgccctacagagctcgttttcagttgtccggaatgcg
gcggctcagtgcctcgctgctatgtgtgacgtgatgacagacgagggcatgaagagagtt
gtagatgacgtggtacccctggtgggtgatgccaaaaaggcctattctcgacagggtgct
gtagaagccattcaccgtattatcaaggttcttgacctcaaagctcttccttatgtcctt
ttcctcatcgtccccatcctggggcgtatgtccgatcccgatgagcatgtccgtctgcta
tcaaccagcacttttgcctcgctcgtcaagatggttcctttagaagctggtattcctgat
cctcctggcttttctgcggaccttctagcgaagagagatgaggagcgcaagttcctcatg
cagttgctagatggcagcaaggctgagcagtaccagatcccggtggagatcaaggctgaa
ttacgacaatatcaaaaagatggtgtcagctggttggcgttcttggcaaagtatcaactg
catggcattctctgtgacgatatgggtctcggtaagagtttgcagagtatttgtataatt
gcgagcaagcaccacgagcgtgccgagcgccacaaagctacccaatcaattgattcggct
catcttccgtctcttattgtctgtcctcccacgctcactggtcactggtatcacgaaatc
ctcaaattcgctcctcacctccgcgcggtgcaatatgttggttccacttttgaacgtgct
acccttcgtcgatccctttcttcttatgatgttgtaatttcctcgtatgagtgcgttcgt
tctgacatctctgaactctccaaatttagcttcctctactgcgttttggatgaagggcat
atcatcaaaaacaccaagaccaagctagctgtggctgtgaagcaaatcaaagctcagcac
agattattgctttctggtactcctattcaaaacaatgtgcttgagctttggagtctgttt
gatttcttgatgccgggattcctcggtaatgagagaacatttaatgagaaattctcgaag
ccgatcttggctgaccgagagggtaaggccactccgaaagagcgtgaagcagccgcaaat
gcccttgaggctctgcataaacaggttcttcccttccttcttcgtcgactcaaagaagat
gtcttgaacgaccttccgccaaagatcatccaagattactattgcgagctttctcccgta
caacaacagctttacgaagagttctctcgctccaaagcggctgaagaagccggtatggag
attgagacttcggcatcgaaagaaggtcagggccacgttttccagagtttgcagtatctc
agaaagttgtgtaaccatcctgcattggtactggacggcgaaccgcaaagatttaaggaa
atacagaagaagattggtggcgggccagaattacacgatttatcacatgcaccaaagatg
gaggctttgaagcaactgttgcaagactgtggtatcggtcttccggtcgacaagcttgct
gacgatgtcaccactcatcgagtccttatcttctgtcaacttcgtcccatgctcgacatc
attgagaaagatctttttggtacccatatgcccacagtatcttatatgcgtcttgatggc
tccactgatcctcggaagcgacatgccatcgttcagacgttcaatgcggaccctagaatt
gatgttttgctgttgacgacgagtgttggaggtttgggtctgaacttgacgggtgccgac
accgtcatctttgtggaccacgattggaacccgatgaaggatttgcaggcgatggatagg
gcgcataggctgggtcagaggaaggttgtgaatgtgtataggttaattactcgtggaaca
ttggaagagaagattatgggtctacaacggttcaagctgaacattgcttcatccgtcgta
actcaacaaaacgccggtctcggatctatgaacacaggagaagtgctcgacttgttcaaa
gtcagtgccgaaggcgaaccagtaaagacgaaatctgctgggacgggcgcggtgtctatg
agcaaaatgttggaagagttggatgagcttccgccagaggatgagtacgcagagttgtca
ttgtcaaatttcctcagcaaagtataa
DBGET
integrated database retrieval system